Protein–RNA interactions for Protein: A6NHT5

HMX3, Homeobox protein HMX3, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMX3A6NHT5 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HMX3A6NHT5 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HMX3A6NHT5 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMX3A6NHT5 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
HMX3A6NHT5 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.41□□□□□ -0.1
HMX3A6NHT5 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMX3A6NHT5 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMX3A6NHT5 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMX3A6NHT5 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HMX3A6NHT5 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMX3A6NHT5 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.41□□□□□ -0.1
HMX3A6NHT5 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
HMX3A6NHT5 CD70-202ENST00000423145 881 ntTSL 2 BASIC14.41□□□□□ -0.1
HMX3A6NHT5 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC14.41□□□□□ -0.1
HMX3A6NHT5 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC14.41□□□□□ -0.1
HMX3A6NHT5 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
HMX3A6NHT5 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC14.41□□□□□ -0.1
HMX3A6NHT5 REEP1-209ENST00000541910 969 ntTSL 2 BASIC14.41□□□□□ -0.1
HMX3A6NHT5 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HMX3A6NHT5 MIR3917-201ENST00000580971 93 ntBASIC14.41□□□□□ -0.1
HMX3A6NHT5 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC14.41□□□□□ -0.1
HMX3A6NHT5 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HMX3A6NHT5 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC14.41□□□□□ -0.1
HMX3A6NHT5 AL157888.1-201ENST00000631930 593 ntBASIC14.41□□□□□ -0.1
HMX3A6NHT5 AC133561.5-201ENST00000635547 218 ntBASIC14.41□□□□□ -0.1
HMX3A6NHT5 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HMX3A6NHT5 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC14.41□□□□□ -0.1
HMX3A6NHT5 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HMX3A6NHT5 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMX3A6NHT5 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMX3A6NHT5 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HMX3A6NHT5 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HMX3A6NHT5 AC005252.3-201ENST00000623855 2258 ntBASIC14.41□□□□□ -0.1
HMX3A6NHT5 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMX3A6NHT5 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMX3A6NHT5 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
HMX3A6NHT5 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMX3A6NHT5 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HMX3A6NHT5 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMX3A6NHT5 CICP23-201ENST00000605013 2741 ntBASIC14.41□□□□□ -0.1
HMX3A6NHT5 AC004817.3-201ENST00000602957 2129 ntBASIC14.41□□□□□ -0.1
HMX3A6NHT5 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC14.41□□□□□ -0.1
HMX3A6NHT5 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMX3A6NHT5 GGT4P-201ENST00000623672 1708 ntBASIC14.41□□□□□ -0.1
HMX3A6NHT5 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
HMX3A6NHT5 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
HMX3A6NHT5 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HMX3A6NHT5 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC14.41□□□□□ -0.1
HMX3A6NHT5 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HMX3A6NHT5 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HMX3A6NHT5 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
HMX3A6NHT5 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMX3A6NHT5 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
HMX3A6NHT5 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.4□□□□□ -0.1
HMX3A6NHT5 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
HMX3A6NHT5 AC005840.4-201ENST00000541242 2494 ntBASIC14.4□□□□□ -0.1
HMX3A6NHT5 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMX3A6NHT5 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMX3A6NHT5 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HMX3A6NHT5 OR2I1P-210ENST00000642037 4691 ntBASIC14.4□□□□□ -0.1
HMX3A6NHT5 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMX3A6NHT5 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.4□□□□□ -0.1
HMX3A6NHT5 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HMX3A6NHT5 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.4□□□□□ -0.1
HMX3A6NHT5 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMX3A6NHT5 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMX3A6NHT5 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HMX3A6NHT5 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
HMX3A6NHT5 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HMX3A6NHT5 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMX3A6NHT5 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.4□□□□□ -0.1
HMX3A6NHT5 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMX3A6NHT5 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HMX3A6NHT5 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMX3A6NHT5 LIN28AP1-201ENST00000429574 405 ntBASIC14.4□□□□□ -0.1
HMX3A6NHT5 SLC25A3P1-201ENST00000443844 931 ntBASIC14.4□□□□□ -0.1
HMX3A6NHT5 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMX3A6NHT5 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC14.4□□□□□ -0.1
HMX3A6NHT5 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC14.4□□□□□ -0.1
HMX3A6NHT5 AL023973.1-201ENST00000624619 620 ntBASIC14.4□□□□□ -0.1
HMX3A6NHT5 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMX3A6NHT5 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMX3A6NHT5 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
HMX3A6NHT5 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
HMX3A6NHT5 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.4□□□□□ -0.1
HMX3A6NHT5 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
HMX3A6NHT5 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HMX3A6NHT5 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMX3A6NHT5 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.4□□□□□ -0.1
HMX3A6NHT5 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMX3A6NHT5 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMX3A6NHT5 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMX3A6NHT5 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HMX3A6NHT5 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMX3A6NHT5 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMX3A6NHT5 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMX3A6NHT5 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMX3A6NHT5 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMX3A6NHT5 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.39□□□□□ -0.11
HMX3A6NHT5 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms