Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
TBC1D3BA6NDS4 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TBC1D3BA6NDS4 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.74■□□□□ 0.27
TBC1D3BA6NDS4 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.74■□□□□ 0.27
TBC1D3BA6NDS4 AC027307.3-201ENST00000594262 1100 ntBASIC16.74■□□□□ 0.27
TBC1D3BA6NDS4 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.74■□□□□ 0.27
TBC1D3BA6NDS4 AC004233.3-201ENST00000607794 1269 ntBASIC16.74■□□□□ 0.27
TBC1D3BA6NDS4 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.74■□□□□ 0.27
TBC1D3BA6NDS4 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.74■□□□□ 0.27
TBC1D3BA6NDS4 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TBC1D3BA6NDS4 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TBC1D3BA6NDS4 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TBC1D3BA6NDS4 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.74■□□□□ 0.27
TBC1D3BA6NDS4 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
TBC1D3BA6NDS4 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TBC1D3BA6NDS4 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TBC1D3BA6NDS4 AC026471.1-201ENST00000564629 3026 ntBASIC16.74■□□□□ 0.27
TBC1D3BA6NDS4 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TBC1D3BA6NDS4 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TBC1D3BA6NDS4 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
TBC1D3BA6NDS4 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
TBC1D3BA6NDS4 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TBC1D3BA6NDS4 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TBC1D3BA6NDS4 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TBC1D3BA6NDS4 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TBC1D3BA6NDS4 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
TBC1D3BA6NDS4 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.73■□□□□ 0.27
TBC1D3BA6NDS4 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TBC1D3BA6NDS4 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TBC1D3BA6NDS4 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TBC1D3BA6NDS4 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TBC1D3BA6NDS4 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TBC1D3BA6NDS4 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.73■□□□□ 0.27
TBC1D3BA6NDS4 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TBC1D3BA6NDS4 PIN1P1-201ENST00000412108 996 ntBASIC16.73■□□□□ 0.27
TBC1D3BA6NDS4 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.73■□□□□ 0.27
TBC1D3BA6NDS4 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.73■□□□□ 0.27
TBC1D3BA6NDS4 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.73■□□□□ 0.27
TBC1D3BA6NDS4 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.73■□□□□ 0.27
TBC1D3BA6NDS4 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.73■□□□□ 0.27
TBC1D3BA6NDS4 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC16.73■□□□□ 0.27
TBC1D3BA6NDS4 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
TBC1D3BA6NDS4 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.73■□□□□ 0.27
TBC1D3BA6NDS4 AC005225.4-201ENST00000557330 545 ntBASIC16.73■□□□□ 0.27
TBC1D3BA6NDS4 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.73■□□□□ 0.27
TBC1D3BA6NDS4 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
TBC1D3BA6NDS4 AC012645.4-201ENST00000610691 1061 ntBASIC16.73■□□□□ 0.27
TBC1D3BA6NDS4 AC020765.3-201ENST00000613051 740 ntBASIC16.73■□□□□ 0.27
TBC1D3BA6NDS4 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.73■□□□□ 0.27
TBC1D3BA6NDS4 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TBC1D3BA6NDS4 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TBC1D3BA6NDS4 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
TBC1D3BA6NDS4 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TBC1D3BA6NDS4 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.73■□□□□ 0.27
TBC1D3BA6NDS4 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.73■□□□□ 0.27
TBC1D3BA6NDS4 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
TBC1D3BA6NDS4 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.73■□□□□ 0.27
TBC1D3BA6NDS4 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TBC1D3BA6NDS4 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.73■□□□□ 0.27
TBC1D3BA6NDS4 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.73■□□□□ 0.27
TBC1D3BA6NDS4 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.73■□□□□ 0.27
TBC1D3BA6NDS4 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
TBC1D3BA6NDS4 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TBC1D3BA6NDS4 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TBC1D3BA6NDS4 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.73■□□□□ 0.27
TBC1D3BA6NDS4 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
TBC1D3BA6NDS4 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.73■□□□□ 0.27
TBC1D3BA6NDS4 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TBC1D3BA6NDS4 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TBC1D3BA6NDS4 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
TBC1D3BA6NDS4 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
TBC1D3BA6NDS4 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TBC1D3BA6NDS4 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TBC1D3BA6NDS4 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TBC1D3BA6NDS4 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
TBC1D3BA6NDS4 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
TBC1D3BA6NDS4 RPL37AP1-201ENST00000412502 279 ntBASIC16.72■□□□□ 0.27
TBC1D3BA6NDS4 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.72■□□□□ 0.27
TBC1D3BA6NDS4 CRB3P1-201ENST00000449338 276 ntBASIC16.72■□□□□ 0.27
TBC1D3BA6NDS4 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.72■□□□□ 0.27
TBC1D3BA6NDS4 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC16.72■□□□□ 0.27
TBC1D3BA6NDS4 TEX28P1-201ENST00000613479 1221 ntBASIC16.72■□□□□ 0.27
TBC1D3BA6NDS4 TEX28P2-201ENST00000617764 1221 ntBASIC16.72■□□□□ 0.27
TBC1D3BA6NDS4 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TBC1D3BA6NDS4 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TBC1D3BA6NDS4 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.72■□□□□ 0.27
TBC1D3BA6NDS4 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
TBC1D3BA6NDS4 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TBC1D3BA6NDS4 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TBC1D3BA6NDS4 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
TBC1D3BA6NDS4 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TBC1D3BA6NDS4 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
TBC1D3BA6NDS4 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TBC1D3BA6NDS4 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
TBC1D3BA6NDS4 AC060834.1-201ENST00000443027 2032 ntBASIC16.72■□□□□ 0.27
TBC1D3BA6NDS4 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TBC1D3BA6NDS4 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TBC1D3BA6NDS4 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.72■□□□□ 0.27
TBC1D3BA6NDS4 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
TBC1D3BA6NDS4 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms