Protein–RNA interactions for Protein: R4GMW8

BIVM-ERCC5, BIVM-ERCC5 readthrough, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BIVM-ERCC5R4GMW8 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC27.03■■□□□ 1.92
BIVM-ERCC5R4GMW8 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
BIVM-ERCC5R4GMW8 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC27.03■■□□□ 1.92
BIVM-ERCC5R4GMW8 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC27.03■■□□□ 1.92
BIVM-ERCC5R4GMW8 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC27.03■■□□□ 1.92
BIVM-ERCC5R4GMW8 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC27.03■■□□□ 1.92
BIVM-ERCC5R4GMW8 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
BIVM-ERCC5R4GMW8 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC27.03■■□□□ 1.92
BIVM-ERCC5R4GMW8 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC27.03■■□□□ 1.92
BIVM-ERCC5R4GMW8 LETM1P2-201ENST00000597330 2178 ntBASIC27.03■■□□□ 1.92
BIVM-ERCC5R4GMW8 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
BIVM-ERCC5R4GMW8 RPL28-204ENST00000431533 590 ntTSL 2 BASIC27.02■■□□□ 1.92
BIVM-ERCC5R4GMW8 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC27.02■■□□□ 1.92
BIVM-ERCC5R4GMW8 RN7SL399P-201ENST00000471648 279 ntBASIC27.02■■□□□ 1.92
BIVM-ERCC5R4GMW8 RPL28-206ENST00000558752 671 ntTSL 3 BASIC27.02■■□□□ 1.92
BIVM-ERCC5R4GMW8 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC27.02■■□□□ 1.92
BIVM-ERCC5R4GMW8 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
BIVM-ERCC5R4GMW8 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC27.02■■□□□ 1.92
BIVM-ERCC5R4GMW8 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
BIVM-ERCC5R4GMW8 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC27.02■■□□□ 1.92
BIVM-ERCC5R4GMW8 EML3-217ENST00000531557 2509 ntTSL 5 BASIC27.02■■□□□ 1.92
BIVM-ERCC5R4GMW8 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC27.02■■□□□ 1.92
BIVM-ERCC5R4GMW8 REXO1L6P-201ENST00000603433 1515 ntBASIC27.02■■□□□ 1.92
BIVM-ERCC5R4GMW8 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
BIVM-ERCC5R4GMW8 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
BIVM-ERCC5R4GMW8 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC27.02■■□□□ 1.92
BIVM-ERCC5R4GMW8 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
BIVM-ERCC5R4GMW8 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC27.02■■□□□ 1.92
BIVM-ERCC5R4GMW8 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC27.01■■□□□ 1.92
BIVM-ERCC5R4GMW8 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.92
BIVM-ERCC5R4GMW8 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC27.01■■□□□ 1.92
BIVM-ERCC5R4GMW8 TOMM22P5-201ENST00000416399 439 ntBASIC27.01■■□□□ 1.92
BIVM-ERCC5R4GMW8 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC27.01■■□□□ 1.92
BIVM-ERCC5R4GMW8 KRT18P64-201ENST00000434946 1219 ntBASIC27.01■■□□□ 1.92
BIVM-ERCC5R4GMW8 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC27.01■■□□□ 1.92
BIVM-ERCC5R4GMW8 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC27.01■■□□□ 1.92
BIVM-ERCC5R4GMW8 ABBA01031660.1-201ENST00000635219 756 ntBASIC27.01■■□□□ 1.92
BIVM-ERCC5R4GMW8 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.92
BIVM-ERCC5R4GMW8 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC27.01■■□□□ 1.91
BIVM-ERCC5R4GMW8 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
BIVM-ERCC5R4GMW8 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
BIVM-ERCC5R4GMW8 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
BIVM-ERCC5R4GMW8 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
BIVM-ERCC5R4GMW8 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC27.01■■□□□ 1.91
BIVM-ERCC5R4GMW8 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC27.01■■□□□ 1.91
BIVM-ERCC5R4GMW8 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
BIVM-ERCC5R4GMW8 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC27.01■■□□□ 1.91
BIVM-ERCC5R4GMW8 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
BIVM-ERCC5R4GMW8 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC27.01■■□□□ 1.91
BIVM-ERCC5R4GMW8 MPV17-206ENST00000402722 827 ntTSL 3 BASIC27.01■■□□□ 1.91
BIVM-ERCC5R4GMW8 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC27.01■■□□□ 1.91
BIVM-ERCC5R4GMW8 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC27.01■■□□□ 1.91
BIVM-ERCC5R4GMW8 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
BIVM-ERCC5R4GMW8 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC27.01■■□□□ 1.91
BIVM-ERCC5R4GMW8 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC27.01■■□□□ 1.91
BIVM-ERCC5R4GMW8 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC27.01■■□□□ 1.91
BIVM-ERCC5R4GMW8 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC27.01■■□□□ 1.91
BIVM-ERCC5R4GMW8 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC27■■□□□ 1.91
BIVM-ERCC5R4GMW8 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC27■■□□□ 1.91
BIVM-ERCC5R4GMW8 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC27■■□□□ 1.91
BIVM-ERCC5R4GMW8 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC27■■□□□ 1.91
BIVM-ERCC5R4GMW8 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
BIVM-ERCC5R4GMW8 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC27■■□□□ 1.91
BIVM-ERCC5R4GMW8 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC27■■□□□ 1.91
BIVM-ERCC5R4GMW8 AL049840.4-201ENST00000602422 811 ntBASIC27■■□□□ 1.91
BIVM-ERCC5R4GMW8 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
BIVM-ERCC5R4GMW8 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC27■■□□□ 1.91
BIVM-ERCC5R4GMW8 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC27■■□□□ 1.91
BIVM-ERCC5R4GMW8 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
BIVM-ERCC5R4GMW8 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC26.99■■□□□ 1.91
BIVM-ERCC5R4GMW8 AL691432.1-201ENST00000596308 1422 ntBASIC26.99■■□□□ 1.91
BIVM-ERCC5R4GMW8 RPF1-202ENST00000370656 724 ntTSL 2 BASIC26.99■■□□□ 1.91
BIVM-ERCC5R4GMW8 PKIG-203ENST00000372887 769 ntTSL 3 BASIC26.99■■□□□ 1.91
BIVM-ERCC5R4GMW8 AC004987.2-201ENST00000395959 1148 ntBASIC26.99■■□□□ 1.91
BIVM-ERCC5R4GMW8 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC26.99■■□□□ 1.91
BIVM-ERCC5R4GMW8 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC26.99■■□□□ 1.91
BIVM-ERCC5R4GMW8 AC068587.3-201ENST00000526613 355 ntBASIC26.99■■□□□ 1.91
BIVM-ERCC5R4GMW8 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC26.99■■□□□ 1.91
BIVM-ERCC5R4GMW8 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC26.99■■□□□ 1.91
BIVM-ERCC5R4GMW8 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
BIVM-ERCC5R4GMW8 TECR-220ENST00000600083 1204 ntTSL 2 BASIC26.99■■□□□ 1.91
BIVM-ERCC5R4GMW8 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC26.99■■□□□ 1.91
BIVM-ERCC5R4GMW8 MIR6799-201ENST00000620297 69 ntBASIC26.99■■□□□ 1.91
BIVM-ERCC5R4GMW8 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
BIVM-ERCC5R4GMW8 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
BIVM-ERCC5R4GMW8 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC26.98■■□□□ 1.91
BIVM-ERCC5R4GMW8 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC26.98■■□□□ 1.91
BIVM-ERCC5R4GMW8 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC26.98■■□□□ 1.91
BIVM-ERCC5R4GMW8 AC099336.1-201ENST00000417053 1171 ntBASIC26.98■■□□□ 1.91
BIVM-ERCC5R4GMW8 POU5F1P6-201ENST00000466990 990 ntBASIC26.98■■□□□ 1.91
BIVM-ERCC5R4GMW8 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC26.98■■□□□ 1.91
BIVM-ERCC5R4GMW8 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC26.98■■□□□ 1.91
BIVM-ERCC5R4GMW8 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC26.98■■□□□ 1.91
BIVM-ERCC5R4GMW8 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC26.98■■□□□ 1.91
BIVM-ERCC5R4GMW8 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
BIVM-ERCC5R4GMW8 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
BIVM-ERCC5R4GMW8 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC26.98■■□□□ 1.91
BIVM-ERCC5R4GMW8 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC26.98■■□□□ 1.91
BIVM-ERCC5R4GMW8 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC26.98■■□□□ 1.91
BIVM-ERCC5R4GMW8 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC26.98■■□□□ 1.91
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms