Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC8.52□□□□□ -1.05
LINC01558Q9Y6Z2 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
LINC01558Q9Y6Z2 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC8.52□□□□□ -1.05
LINC01558Q9Y6Z2 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
LINC01558Q9Y6Z2 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
LINC01558Q9Y6Z2 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC8.52□□□□□ -1.05
LINC01558Q9Y6Z2 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC8.52□□□□□ -1.05
LINC01558Q9Y6Z2 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
LINC01558Q9Y6Z2 LSM4-201ENST00000252816 986 ntTSL 2 BASIC8.52□□□□□ -1.05
LINC01558Q9Y6Z2 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
LINC01558Q9Y6Z2 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
LINC01558Q9Y6Z2 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
LINC01558Q9Y6Z2 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
LINC01558Q9Y6Z2 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC8.52□□□□□ -1.05
LINC01558Q9Y6Z2 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC8.52□□□□□ -1.05
LINC01558Q9Y6Z2 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC8.52□□□□□ -1.05
LINC01558Q9Y6Z2 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC8.52□□□□□ -1.05
LINC01558Q9Y6Z2 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
LINC01558Q9Y6Z2 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
LINC01558Q9Y6Z2 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.05
LINC01558Q9Y6Z2 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
LINC01558Q9Y6Z2 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC8.52□□□□□ -1.05
LINC01558Q9Y6Z2 AC083964.2-201ENST00000623988 2396 ntBASIC8.52□□□□□ -1.05
LINC01558Q9Y6Z2 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC8.52□□□□□ -1.05
LINC01558Q9Y6Z2 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
LINC01558Q9Y6Z2 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC8.52□□□□□ -1.05
LINC01558Q9Y6Z2 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC8.52□□□□□ -1.05
LINC01558Q9Y6Z2 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC8.52□□□□□ -1.05
LINC01558Q9Y6Z2 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
LINC01558Q9Y6Z2 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.05
LINC01558Q9Y6Z2 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC8.52□□□□□ -1.05
LINC01558Q9Y6Z2 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
LINC01558Q9Y6Z2 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
LINC01558Q9Y6Z2 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
LINC01558Q9Y6Z2 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
LINC01558Q9Y6Z2 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.05
LINC01558Q9Y6Z2 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
LINC01558Q9Y6Z2 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC8.52□□□□□ -1.05
LINC01558Q9Y6Z2 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
LINC01558Q9Y6Z2 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC8.52□□□□□ -1.05
LINC01558Q9Y6Z2 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC8.52□□□□□ -1.05
LINC01558Q9Y6Z2 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
LINC01558Q9Y6Z2 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
LINC01558Q9Y6Z2 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC8.52□□□□□ -1.05
LINC01558Q9Y6Z2 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
LINC01558Q9Y6Z2 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC8.52□□□□□ -1.05
LINC01558Q9Y6Z2 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC8.52□□□□□ -1.05
LINC01558Q9Y6Z2 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
LINC01558Q9Y6Z2 TKT-202ENST00000423516 2075 ntTSL 2 BASIC8.52□□□□□ -1.05
LINC01558Q9Y6Z2 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
LINC01558Q9Y6Z2 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
LINC01558Q9Y6Z2 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
LINC01558Q9Y6Z2 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC8.52□□□□□ -1.05
LINC01558Q9Y6Z2 AL031595.1-201ENST00000623969 4709 ntBASIC8.52□□□□□ -1.05
LINC01558Q9Y6Z2 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC8.52□□□□□ -1.05
LINC01558Q9Y6Z2 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
LINC01558Q9Y6Z2 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
LINC01558Q9Y6Z2 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC8.52□□□□□ -1.05
LINC01558Q9Y6Z2 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
LINC01558Q9Y6Z2 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC8.51□□□□□ -1.05
LINC01558Q9Y6Z2 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
LINC01558Q9Y6Z2 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC8.51□□□□□ -1.05
LINC01558Q9Y6Z2 AC011700.1-201ENST00000610409 2627 ntBASIC8.51□□□□□ -1.05
LINC01558Q9Y6Z2 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
LINC01558Q9Y6Z2 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
LINC01558Q9Y6Z2 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
LINC01558Q9Y6Z2 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC8.51□□□□□ -1.05
LINC01558Q9Y6Z2 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
LINC01558Q9Y6Z2 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC8.51□□□□□ -1.05
LINC01558Q9Y6Z2 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
LINC01558Q9Y6Z2 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
LINC01558Q9Y6Z2 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC8.51□□□□□ -1.05
LINC01558Q9Y6Z2 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
LINC01558Q9Y6Z2 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
LINC01558Q9Y6Z2 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
LINC01558Q9Y6Z2 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
LINC01558Q9Y6Z2 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC8.51□□□□□ -1.05
LINC01558Q9Y6Z2 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
LINC01558Q9Y6Z2 HARS-203ENST00000431330 1774 ntTSL 2 BASIC8.51□□□□□ -1.05
LINC01558Q9Y6Z2 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
LINC01558Q9Y6Z2 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
LINC01558Q9Y6Z2 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
LINC01558Q9Y6Z2 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
LINC01558Q9Y6Z2 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC8.51□□□□□ -1.05
LINC01558Q9Y6Z2 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC8.51□□□□□ -1.05
LINC01558Q9Y6Z2 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC8.51□□□□□ -1.05
LINC01558Q9Y6Z2 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC8.51□□□□□ -1.05
LINC01558Q9Y6Z2 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
LINC01558Q9Y6Z2 AL109659.2-201ENST00000606809 1674 ntBASIC8.51□□□□□ -1.05
LINC01558Q9Y6Z2 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC8.51□□□□□ -1.05
LINC01558Q9Y6Z2 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC8.51□□□□□ -1.05
LINC01558Q9Y6Z2 AC079140.4-201ENST00000507448 529 ntBASIC8.51□□□□□ -1.05
LINC01558Q9Y6Z2 IGHV3-19-201ENST00000521488 291 ntBASIC8.51□□□□□ -1.05
LINC01558Q9Y6Z2 AL121832.2-201ENST00000610979 668 ntBASIC8.51□□□□□ -1.05
LINC01558Q9Y6Z2 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
LINC01558Q9Y6Z2 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
LINC01558Q9Y6Z2 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC8.51□□□□□ -1.05
LINC01558Q9Y6Z2 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
LINC01558Q9Y6Z2 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
LINC01558Q9Y6Z2 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms