Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC24.53■■□□□ 1.52
CDC42BPBQ9Y5S2 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC24.53■■□□□ 1.52
CDC42BPBQ9Y5S2 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CDC42BPBQ9Y5S2 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC24.53■■□□□ 1.52
CDC42BPBQ9Y5S2 BANP-227ENST00000626016 2144 ntTSL 2 BASIC24.53■■□□□ 1.52
CDC42BPBQ9Y5S2 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CDC42BPBQ9Y5S2 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC24.53■■□□□ 1.52
CDC42BPBQ9Y5S2 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CDC42BPBQ9Y5S2 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC24.53■■□□□ 1.52
CDC42BPBQ9Y5S2 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC24.53■■□□□ 1.52
CDC42BPBQ9Y5S2 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CDC42BPBQ9Y5S2 KRT18P64-201ENST00000434946 1219 ntBASIC24.52■■□□□ 1.52
CDC42BPBQ9Y5S2 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
CDC42BPBQ9Y5S2 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC24.52■■□□□ 1.52
CDC42BPBQ9Y5S2 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC24.52■■□□□ 1.52
CDC42BPBQ9Y5S2 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
CDC42BPBQ9Y5S2 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
CDC42BPBQ9Y5S2 TUBB1P2-201ENST00000422712 1306 ntBASIC24.52■■□□□ 1.52
CDC42BPBQ9Y5S2 TUBB1P1-201ENST00000503144 1300 ntBASIC24.52■■□□□ 1.52
CDC42BPBQ9Y5S2 AC093525.8-201ENST00000624099 1342 ntBASIC24.52■■□□□ 1.52
CDC42BPBQ9Y5S2 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC24.52■■□□□ 1.52
CDC42BPBQ9Y5S2 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
CDC42BPBQ9Y5S2 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
CDC42BPBQ9Y5S2 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC24.52■■□□□ 1.52
CDC42BPBQ9Y5S2 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
CDC42BPBQ9Y5S2 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
CDC42BPBQ9Y5S2 LBX2-201ENST00000341396 886 ntTSL 3 BASIC24.52■■□□□ 1.52
CDC42BPBQ9Y5S2 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC24.52■■□□□ 1.52
CDC42BPBQ9Y5S2 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
CDC42BPBQ9Y5S2 STX1A-203ENST00000395155 783 ntTSL 2 BASIC24.52■■□□□ 1.52
CDC42BPBQ9Y5S2 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC24.52■■□□□ 1.52
CDC42BPBQ9Y5S2 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
CDC42BPBQ9Y5S2 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC24.52■■□□□ 1.52
CDC42BPBQ9Y5S2 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC24.52■■□□□ 1.52
CDC42BPBQ9Y5S2 FTH1P14-201ENST00000482930 551 ntBASIC24.52■■□□□ 1.52
CDC42BPBQ9Y5S2 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC24.52■■□□□ 1.52
CDC42BPBQ9Y5S2 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC24.52■■□□□ 1.52
CDC42BPBQ9Y5S2 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC24.52■■□□□ 1.52
CDC42BPBQ9Y5S2 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC24.52■■□□□ 1.52
CDC42BPBQ9Y5S2 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
CDC42BPBQ9Y5S2 CU634019.7-201ENST00000624153 1185 ntBASIC24.52■■□□□ 1.52
CDC42BPBQ9Y5S2 FP236241.2-201ENST00000624906 1185 ntBASIC24.52■■□□□ 1.52
CDC42BPBQ9Y5S2 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
CDC42BPBQ9Y5S2 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC24.52■■□□□ 1.52
CDC42BPBQ9Y5S2 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC24.52■■□□□ 1.52
CDC42BPBQ9Y5S2 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CDC42BPBQ9Y5S2 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
CDC42BPBQ9Y5S2 TP73-213ENST00000604479 1623 ntTSL 5 BASIC24.51■■□□□ 1.51
CDC42BPBQ9Y5S2 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC24.51■■□□□ 1.51
CDC42BPBQ9Y5S2 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC24.51■■□□□ 1.51
CDC42BPBQ9Y5S2 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC24.51■■□□□ 1.51
CDC42BPBQ9Y5S2 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
CDC42BPBQ9Y5S2 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
CDC42BPBQ9Y5S2 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC24.51■■□□□ 1.51
CDC42BPBQ9Y5S2 AC108725.1-201ENST00000495472 409 ntBASIC24.51■■□□□ 1.51
CDC42BPBQ9Y5S2 AC104596.2-201ENST00000512793 793 ntBASIC24.51■■□□□ 1.51
CDC42BPBQ9Y5S2 ZNF767P-206ENST00000513792 565 ntBASIC24.51■■□□□ 1.51
CDC42BPBQ9Y5S2 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
CDC42BPBQ9Y5S2 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC24.51■■□□□ 1.51
CDC42BPBQ9Y5S2 AL049840.4-201ENST00000602422 811 ntBASIC24.51■■□□□ 1.51
CDC42BPBQ9Y5S2 KRT8P37-201ENST00000451609 1420 ntBASIC24.51■■□□□ 1.51
CDC42BPBQ9Y5S2 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC24.51■■□□□ 1.51
CDC42BPBQ9Y5S2 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC24.51■■□□□ 1.51
CDC42BPBQ9Y5S2 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC24.51■■□□□ 1.51
CDC42BPBQ9Y5S2 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
CDC42BPBQ9Y5S2 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
CDC42BPBQ9Y5S2 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CDC42BPBQ9Y5S2 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CDC42BPBQ9Y5S2 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CDC42BPBQ9Y5S2 EML3-217ENST00000531557 2509 ntTSL 5 BASIC24.51■■□□□ 1.51
CDC42BPBQ9Y5S2 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC24.51■■□□□ 1.51
CDC42BPBQ9Y5S2 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CDC42BPBQ9Y5S2 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CDC42BPBQ9Y5S2 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC24.5■■□□□ 1.51
CDC42BPBQ9Y5S2 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CDC42BPBQ9Y5S2 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
CDC42BPBQ9Y5S2 BCYRN1-201ENST00000418539 200 ntBASIC24.5■■□□□ 1.51
CDC42BPBQ9Y5S2 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC24.5■■□□□ 1.51
CDC42BPBQ9Y5S2 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC24.5■■□□□ 1.51
CDC42BPBQ9Y5S2 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC24.5■■□□□ 1.51
CDC42BPBQ9Y5S2 FAM8A2P-201ENST00000528813 1142 ntBASIC24.5■■□□□ 1.51
CDC42BPBQ9Y5S2 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC24.5■■□□□ 1.51
CDC42BPBQ9Y5S2 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC24.5■■□□□ 1.51
CDC42BPBQ9Y5S2 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
CDC42BPBQ9Y5S2 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC24.5■■□□□ 1.51
CDC42BPBQ9Y5S2 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC24.5■■□□□ 1.51
CDC42BPBQ9Y5S2 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC24.5■■□□□ 1.51
CDC42BPBQ9Y5S2 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC24.5■■□□□ 1.51
CDC42BPBQ9Y5S2 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
CDC42BPBQ9Y5S2 TOMM22P5-201ENST00000416399 439 ntBASIC24.49■■□□□ 1.51
CDC42BPBQ9Y5S2 NME4-207ENST00000450036 985 ntTSL 3 BASIC24.49■■□□□ 1.51
CDC42BPBQ9Y5S2 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC24.49■■□□□ 1.51
CDC42BPBQ9Y5S2 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC24.49■■□□□ 1.51
CDC42BPBQ9Y5S2 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC24.49■■□□□ 1.51
CDC42BPBQ9Y5S2 MIR6787-201ENST00000616675 61 ntBASIC24.49■■□□□ 1.51
CDC42BPBQ9Y5S2 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
CDC42BPBQ9Y5S2 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CDC42BPBQ9Y5S2 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC24.49■■□□□ 1.51
CDC42BPBQ9Y5S2 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC24.49■■□□□ 1.51
CDC42BPBQ9Y5S2 AC005622.1-201ENST00000636801 1703 ntBASIC24.49■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms