Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGA6Q9Y5G7 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGA6Q9Y5G7 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGA6Q9Y5G7 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.99■□□□□ 0.15
PCDHGA6Q9Y5G7 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGA6Q9Y5G7 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
PCDHGA6Q9Y5G7 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
PCDHGA6Q9Y5G7 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGA6Q9Y5G7 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGA6Q9Y5G7 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
PCDHGA6Q9Y5G7 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.99■□□□□ 0.15
PCDHGA6Q9Y5G7 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC15.99■□□□□ 0.15
PCDHGA6Q9Y5G7 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGA6Q9Y5G7 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.99■□□□□ 0.15
PCDHGA6Q9Y5G7 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.99■□□□□ 0.15
PCDHGA6Q9Y5G7 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.99■□□□□ 0.15
PCDHGA6Q9Y5G7 AC015911.4-201ENST00000588022 1070 ntBASIC15.99■□□□□ 0.15
PCDHGA6Q9Y5G7 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC15.99■□□□□ 0.15
PCDHGA6Q9Y5G7 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
PCDHGA6Q9Y5G7 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.99■□□□□ 0.15
PCDHGA6Q9Y5G7 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGA6Q9Y5G7 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGA6Q9Y5G7 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.99■□□□□ 0.15
PCDHGA6Q9Y5G7 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.99■□□□□ 0.15
PCDHGA6Q9Y5G7 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGA6Q9Y5G7 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGA6Q9Y5G7 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGA6Q9Y5G7 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGA6Q9Y5G7 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGA6Q9Y5G7 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
PCDHGA6Q9Y5G7 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGA6Q9Y5G7 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGA6Q9Y5G7 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
PCDHGA6Q9Y5G7 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.98■□□□□ 0.15
PCDHGA6Q9Y5G7 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
PCDHGA6Q9Y5G7 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.98■□□□□ 0.15
PCDHGA6Q9Y5G7 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
PCDHGA6Q9Y5G7 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.98■□□□□ 0.15
PCDHGA6Q9Y5G7 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.98■□□□□ 0.15
PCDHGA6Q9Y5G7 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGA6Q9Y5G7 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGA6Q9Y5G7 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGA6Q9Y5G7 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGA6Q9Y5G7 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.98■□□□□ 0.15
PCDHGA6Q9Y5G7 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGA6Q9Y5G7 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC15.98■□□□□ 0.15
PCDHGA6Q9Y5G7 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.98■□□□□ 0.15
PCDHGA6Q9Y5G7 SPCS2P1-201ENST00000561636 679 ntBASIC15.98■□□□□ 0.15
PCDHGA6Q9Y5G7 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.98■□□□□ 0.15
PCDHGA6Q9Y5G7 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGA6Q9Y5G7 AC099522.2-201ENST00000607001 744 ntBASIC15.98■□□□□ 0.15
PCDHGA6Q9Y5G7 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.98■□□□□ 0.15
PCDHGA6Q9Y5G7 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.98■□□□□ 0.15
PCDHGA6Q9Y5G7 AC009093.7-201ENST00000623853 1223 ntBASIC15.98■□□□□ 0.15
PCDHGA6Q9Y5G7 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
PCDHGA6Q9Y5G7 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGA6Q9Y5G7 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGA6Q9Y5G7 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGA6Q9Y5G7 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
PCDHGA6Q9Y5G7 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGA6Q9Y5G7 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGA6Q9Y5G7 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
PCDHGA6Q9Y5G7 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGA6Q9Y5G7 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.98■□□□□ 0.15
PCDHGA6Q9Y5G7 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGA6Q9Y5G7 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGA6Q9Y5G7 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGA6Q9Y5G7 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGA6Q9Y5G7 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGA6Q9Y5G7 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGA6Q9Y5G7 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGA6Q9Y5G7 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGA6Q9Y5G7 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGA6Q9Y5G7 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.97■□□□□ 0.15
PCDHGA6Q9Y5G7 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGA6Q9Y5G7 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGA6Q9Y5G7 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGA6Q9Y5G7 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGA6Q9Y5G7 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGA6Q9Y5G7 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGA6Q9Y5G7 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGA6Q9Y5G7 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGA6Q9Y5G7 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC15.97■□□□□ 0.15
PCDHGA6Q9Y5G7 AL627223.1-201ENST00000416693 442 ntBASIC15.97■□□□□ 0.15
PCDHGA6Q9Y5G7 AL671277.1-201ENST00000429656 993 ntBASIC15.97■□□□□ 0.15
PCDHGA6Q9Y5G7 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.97■□□□□ 0.15
PCDHGA6Q9Y5G7 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC15.97■□□□□ 0.15
PCDHGA6Q9Y5G7 RN7SL589P-201ENST00000481268 310 ntBASIC15.97■□□□□ 0.15
PCDHGA6Q9Y5G7 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.97■□□□□ 0.15
PCDHGA6Q9Y5G7 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.97■□□□□ 0.15
PCDHGA6Q9Y5G7 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.97■□□□□ 0.15
PCDHGA6Q9Y5G7 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.97■□□□□ 0.15
PCDHGA6Q9Y5G7 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.97■□□□□ 0.15
PCDHGA6Q9Y5G7 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
PCDHGA6Q9Y5G7 MIR4515-201ENST00000584082 81 ntBASIC15.97■□□□□ 0.15
PCDHGA6Q9Y5G7 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGA6Q9Y5G7 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGA6Q9Y5G7 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
PCDHGA6Q9Y5G7 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.97■□□□□ 0.15
PCDHGA6Q9Y5G7 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms