Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHB1Q9Y5F3 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHB1Q9Y5F3 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
PCDHB1Q9Y5F3 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHB1Q9Y5F3 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.55■□□□□ 0.24
PCDHB1Q9Y5F3 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHB1Q9Y5F3 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.55■□□□□ 0.24
PCDHB1Q9Y5F3 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.55■□□□□ 0.24
PCDHB1Q9Y5F3 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.55■□□□□ 0.24
PCDHB1Q9Y5F3 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.55■□□□□ 0.24
PCDHB1Q9Y5F3 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.55■□□□□ 0.24
PCDHB1Q9Y5F3 AC025678.2-201ENST00000562061 970 ntBASIC16.55■□□□□ 0.24
PCDHB1Q9Y5F3 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.55■□□□□ 0.24
PCDHB1Q9Y5F3 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.55■□□□□ 0.24
PCDHB1Q9Y5F3 AL645728.2-201ENST00000641974 660 ntBASIC16.55■□□□□ 0.24
PCDHB1Q9Y5F3 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHB1Q9Y5F3 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHB1Q9Y5F3 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
PCDHB1Q9Y5F3 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHB1Q9Y5F3 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHB1Q9Y5F3 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHB1Q9Y5F3 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHB1Q9Y5F3 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
PCDHB1Q9Y5F3 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.55■□□□□ 0.24
PCDHB1Q9Y5F3 AL671710.1-201ENST00000610245 2349 ntBASIC16.54■□□□□ 0.24
PCDHB1Q9Y5F3 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHB1Q9Y5F3 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHB1Q9Y5F3 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
PCDHB1Q9Y5F3 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHB1Q9Y5F3 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.54■□□□□ 0.24
PCDHB1Q9Y5F3 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHB1Q9Y5F3 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHB1Q9Y5F3 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.54■□□□□ 0.24
PCDHB1Q9Y5F3 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.54■□□□□ 0.24
PCDHB1Q9Y5F3 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.54■□□□□ 0.24
PCDHB1Q9Y5F3 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.54■□□□□ 0.24
PCDHB1Q9Y5F3 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHB1Q9Y5F3 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHB1Q9Y5F3 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHB1Q9Y5F3 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.54■□□□□ 0.24
PCDHB1Q9Y5F3 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.54■□□□□ 0.24
PCDHB1Q9Y5F3 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHB1Q9Y5F3 GGT3P-204ENST00000453783 1664 ntBASIC16.54■□□□□ 0.24
PCDHB1Q9Y5F3 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.54■□□□□ 0.24
PCDHB1Q9Y5F3 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHB1Q9Y5F3 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHB1Q9Y5F3 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHB1Q9Y5F3 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHB1Q9Y5F3 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHB1Q9Y5F3 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
PCDHB1Q9Y5F3 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.54■□□□□ 0.24
PCDHB1Q9Y5F3 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.54■□□□□ 0.24
PCDHB1Q9Y5F3 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHB1Q9Y5F3 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHB1Q9Y5F3 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.54■□□□□ 0.24
PCDHB1Q9Y5F3 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHB1Q9Y5F3 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.54■□□□□ 0.24
PCDHB1Q9Y5F3 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.54■□□□□ 0.24
PCDHB1Q9Y5F3 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHB1Q9Y5F3 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHB1Q9Y5F3 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
PCDHB1Q9Y5F3 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
PCDHB1Q9Y5F3 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.54■□□□□ 0.24
PCDHB1Q9Y5F3 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.54■□□□□ 0.24
PCDHB1Q9Y5F3 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
PCDHB1Q9Y5F3 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHB1Q9Y5F3 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.54■□□□□ 0.24
PCDHB1Q9Y5F3 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.54■□□□□ 0.24
PCDHB1Q9Y5F3 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHB1Q9Y5F3 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.54■□□□□ 0.24
PCDHB1Q9Y5F3 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHB1Q9Y5F3 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHB1Q9Y5F3 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHB1Q9Y5F3 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHB1Q9Y5F3 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHB1Q9Y5F3 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.53■□□□□ 0.24
PCDHB1Q9Y5F3 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
PCDHB1Q9Y5F3 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
PCDHB1Q9Y5F3 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.53■□□□□ 0.24
PCDHB1Q9Y5F3 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
PCDHB1Q9Y5F3 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHB1Q9Y5F3 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
PCDHB1Q9Y5F3 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
PCDHB1Q9Y5F3 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.53■□□□□ 0.24
PCDHB1Q9Y5F3 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHB1Q9Y5F3 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
PCDHB1Q9Y5F3 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHB1Q9Y5F3 WBP2-203ENST00000433525 928 ntTSL 2 BASIC16.53■□□□□ 0.24
PCDHB1Q9Y5F3 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHB1Q9Y5F3 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHB1Q9Y5F3 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
PCDHB1Q9Y5F3 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.53■□□□□ 0.24
PCDHB1Q9Y5F3 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC16.53■□□□□ 0.24
PCDHB1Q9Y5F3 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.53■□□□□ 0.24
PCDHB1Q9Y5F3 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.53■□□□□ 0.24
PCDHB1Q9Y5F3 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC16.53■□□□□ 0.24
PCDHB1Q9Y5F3 MIR4745-201ENST00000577608 62 ntBASIC16.53■□□□□ 0.24
PCDHB1Q9Y5F3 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.53■□□□□ 0.24
PCDHB1Q9Y5F3 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.53■□□□□ 0.24
PCDHB1Q9Y5F3 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms