Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
AP4E1Q9UPM8 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
AP4E1Q9UPM8 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.18■□□□□ 0.34
AP4E1Q9UPM8 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
AP4E1Q9UPM8 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.18■□□□□ 0.34
AP4E1Q9UPM8 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
AP4E1Q9UPM8 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
AP4E1Q9UPM8 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
AP4E1Q9UPM8 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
AP4E1Q9UPM8 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
AP4E1Q9UPM8 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.18■□□□□ 0.34
AP4E1Q9UPM8 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
AP4E1Q9UPM8 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
AP4E1Q9UPM8 MIR574-201ENST00000385209 96 ntBASIC17.18■□□□□ 0.34
AP4E1Q9UPM8 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
AP4E1Q9UPM8 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
AP4E1Q9UPM8 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
AP4E1Q9UPM8 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
AP4E1Q9UPM8 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
AP4E1Q9UPM8 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.18■□□□□ 0.34
AP4E1Q9UPM8 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.18■□□□□ 0.34
AP4E1Q9UPM8 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.18■□□□□ 0.34
AP4E1Q9UPM8 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.18■□□□□ 0.34
AP4E1Q9UPM8 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
AP4E1Q9UPM8 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.18■□□□□ 0.34
AP4E1Q9UPM8 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
AP4E1Q9UPM8 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
AP4E1Q9UPM8 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
AP4E1Q9UPM8 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.18■□□□□ 0.34
AP4E1Q9UPM8 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
AP4E1Q9UPM8 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
AP4E1Q9UPM8 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
AP4E1Q9UPM8 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.18■□□□□ 0.34
AP4E1Q9UPM8 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
AP4E1Q9UPM8 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.18■□□□□ 0.34
AP4E1Q9UPM8 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
AP4E1Q9UPM8 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
AP4E1Q9UPM8 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.17■□□□□ 0.34
AP4E1Q9UPM8 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.17■□□□□ 0.34
AP4E1Q9UPM8 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
AP4E1Q9UPM8 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.17■□□□□ 0.34
AP4E1Q9UPM8 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
AP4E1Q9UPM8 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
AP4E1Q9UPM8 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
AP4E1Q9UPM8 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.17■□□□□ 0.34
AP4E1Q9UPM8 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
AP4E1Q9UPM8 CYP2T1P-202ENST00000641596 2535 ntBASIC17.17■□□□□ 0.34
AP4E1Q9UPM8 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
AP4E1Q9UPM8 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.17■□□□□ 0.34
AP4E1Q9UPM8 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.17■□□□□ 0.34
AP4E1Q9UPM8 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
AP4E1Q9UPM8 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.17■□□□□ 0.34
AP4E1Q9UPM8 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
AP4E1Q9UPM8 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
AP4E1Q9UPM8 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
AP4E1Q9UPM8 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
AP4E1Q9UPM8 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
AP4E1Q9UPM8 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
AP4E1Q9UPM8 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
AP4E1Q9UPM8 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
AP4E1Q9UPM8 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
AP4E1Q9UPM8 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
AP4E1Q9UPM8 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
AP4E1Q9UPM8 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
AP4E1Q9UPM8 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
AP4E1Q9UPM8 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
AP4E1Q9UPM8 AC023274.1-201ENST00000418278 595 ntBASIC17.17■□□□□ 0.34
AP4E1Q9UPM8 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
AP4E1Q9UPM8 AC092474.2-201ENST00000424288 719 ntBASIC17.17■□□□□ 0.34
AP4E1Q9UPM8 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.17■□□□□ 0.34
AP4E1Q9UPM8 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
AP4E1Q9UPM8 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.17■□□□□ 0.34
AP4E1Q9UPM8 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
AP4E1Q9UPM8 POLD2P1-201ENST00000511220 997 ntBASIC17.17■□□□□ 0.34
AP4E1Q9UPM8 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
AP4E1Q9UPM8 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.17■□□□□ 0.34
AP4E1Q9UPM8 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.17■□□□□ 0.34
AP4E1Q9UPM8 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.17■□□□□ 0.34
AP4E1Q9UPM8 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
AP4E1Q9UPM8 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
AP4E1Q9UPM8 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
AP4E1Q9UPM8 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
AP4E1Q9UPM8 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.17■□□□□ 0.34
AP4E1Q9UPM8 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.17■□□□□ 0.34
AP4E1Q9UPM8 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
AP4E1Q9UPM8 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
AP4E1Q9UPM8 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
AP4E1Q9UPM8 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
AP4E1Q9UPM8 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
AP4E1Q9UPM8 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
AP4E1Q9UPM8 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
AP4E1Q9UPM8 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.16■□□□□ 0.34
AP4E1Q9UPM8 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
AP4E1Q9UPM8 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
AP4E1Q9UPM8 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
AP4E1Q9UPM8 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
AP4E1Q9UPM8 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
AP4E1Q9UPM8 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
AP4E1Q9UPM8 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.16■□□□□ 0.34
AP4E1Q9UPM8 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms