Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NPIPA1Q9UND3 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
NPIPA1Q9UND3 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.29■□□□□ 0.04
NPIPA1Q9UND3 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NPIPA1Q9UND3 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
NPIPA1Q9UND3 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NPIPA1Q9UND3 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NPIPA1Q9UND3 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.29■□□□□ 0.04
NPIPA1Q9UND3 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NPIPA1Q9UND3 TUBB8P12-201ENST00000308911 1335 ntBASIC15.29■□□□□ 0.04
NPIPA1Q9UND3 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NPIPA1Q9UND3 TUBB7P-202ENST00000428444 1305 ntBASIC15.29■□□□□ 0.04
NPIPA1Q9UND3 TUBB8P7-204ENST00000567960 1332 ntBASIC15.29■□□□□ 0.04
NPIPA1Q9UND3 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NPIPA1Q9UND3 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NPIPA1Q9UND3 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NPIPA1Q9UND3 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.29■□□□□ 0.04
NPIPA1Q9UND3 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NPIPA1Q9UND3 RN7SL589P-201ENST00000481268 310 ntBASIC15.29■□□□□ 0.04
NPIPA1Q9UND3 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC15.29■□□□□ 0.04
NPIPA1Q9UND3 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NPIPA1Q9UND3 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
NPIPA1Q9UND3 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NPIPA1Q9UND3 RPL28-205ENST00000558131 444 ntTSL 5 BASIC15.29■□□□□ 0.04
NPIPA1Q9UND3 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.29■□□□□ 0.04
NPIPA1Q9UND3 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC15.29■□□□□ 0.04
NPIPA1Q9UND3 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
NPIPA1Q9UND3 AL135744.1-201ENST00000565098 629 ntBASIC15.29■□□□□ 0.04
NPIPA1Q9UND3 RARRES2P8-201ENST00000566335 367 ntBASIC15.29■□□□□ 0.04
NPIPA1Q9UND3 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.29■□□□□ 0.04
NPIPA1Q9UND3 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NPIPA1Q9UND3 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC15.29■□□□□ 0.04
NPIPA1Q9UND3 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
NPIPA1Q9UND3 AL161645.1-201ENST00000622716 1255 ntBASIC15.29■□□□□ 0.04
NPIPA1Q9UND3 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NPIPA1Q9UND3 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NPIPA1Q9UND3 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
NPIPA1Q9UND3 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NPIPA1Q9UND3 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NPIPA1Q9UND3 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NPIPA1Q9UND3 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NPIPA1Q9UND3 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
NPIPA1Q9UND3 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.28■□□□□ 0.04
NPIPA1Q9UND3 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.28■□□□□ 0.04
NPIPA1Q9UND3 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.28■□□□□ 0.04
NPIPA1Q9UND3 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.28■□□□□ 0.04
NPIPA1Q9UND3 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
NPIPA1Q9UND3 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NPIPA1Q9UND3 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NPIPA1Q9UND3 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC15.28■□□□□ 0.04
NPIPA1Q9UND3 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
NPIPA1Q9UND3 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.28■□□□□ 0.04
NPIPA1Q9UND3 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
NPIPA1Q9UND3 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NPIPA1Q9UND3 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
NPIPA1Q9UND3 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NPIPA1Q9UND3 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NPIPA1Q9UND3 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.28■□□□□ 0.04
NPIPA1Q9UND3 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.28■□□□□ 0.04
NPIPA1Q9UND3 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.28■□□□□ 0.04
NPIPA1Q9UND3 KRT18P32-201ENST00000424695 1287 ntBASIC15.28■□□□□ 0.04
NPIPA1Q9UND3 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NPIPA1Q9UND3 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.28■□□□□ 0.04
NPIPA1Q9UND3 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.28■□□□□ 0.04
NPIPA1Q9UND3 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15.28■□□□□ 0.04
NPIPA1Q9UND3 AC009093.7-201ENST00000623853 1223 ntBASIC15.28■□□□□ 0.04
NPIPA1Q9UND3 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NPIPA1Q9UND3 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.28■□□□□ 0.04
NPIPA1Q9UND3 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.28■□□□□ 0.04
NPIPA1Q9UND3 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
NPIPA1Q9UND3 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
NPIPA1Q9UND3 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NPIPA1Q9UND3 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.28■□□□□ 0.04
NPIPA1Q9UND3 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.28■□□□□ 0.04
NPIPA1Q9UND3 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.28■□□□□ 0.04
NPIPA1Q9UND3 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.28■□□□□ 0.04
NPIPA1Q9UND3 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NPIPA1Q9UND3 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NPIPA1Q9UND3 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NPIPA1Q9UND3 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NPIPA1Q9UND3 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NPIPA1Q9UND3 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
NPIPA1Q9UND3 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
NPIPA1Q9UND3 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NPIPA1Q9UND3 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NPIPA1Q9UND3 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
NPIPA1Q9UND3 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.27■□□□□ 0.04
NPIPA1Q9UND3 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NPIPA1Q9UND3 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
NPIPA1Q9UND3 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NPIPA1Q9UND3 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.27■□□□□ 0.04
NPIPA1Q9UND3 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
NPIPA1Q9UND3 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
NPIPA1Q9UND3 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NPIPA1Q9UND3 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
NPIPA1Q9UND3 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
NPIPA1Q9UND3 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NPIPA1Q9UND3 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
NPIPA1Q9UND3 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NPIPA1Q9UND3 AP002490.2-201ENST00000524791 560 ntBASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms