Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 FAM8A3P-201ENST00000427218 844 ntBASIC15.19■□□□□ 0.02
LRFN1Q9P244 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.19■□□□□ 0.02
LRFN1Q9P244 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC15.19■□□□□ 0.02
LRFN1Q9P244 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.19■□□□□ 0.02
LRFN1Q9P244 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.19■□□□□ 0.02
LRFN1Q9P244 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC15.19■□□□□ 0.02
LRFN1Q9P244 PRYP6-201ENST00000514804 343 ntBASIC15.19■□□□□ 0.02
LRFN1Q9P244 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.19■□□□□ 0.02
LRFN1Q9P244 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.19■□□□□ 0.02
LRFN1Q9P244 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.19■□□□□ 0.02
LRFN1Q9P244 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.19■□□□□ 0.02
LRFN1Q9P244 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRFN1Q9P244 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
LRFN1Q9P244 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRFN1Q9P244 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.19■□□□□ 0.02
LRFN1Q9P244 AC060834.1-201ENST00000443027 2032 ntBASIC15.19■□□□□ 0.02
LRFN1Q9P244 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.19■□□□□ 0.02
LRFN1Q9P244 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.19■□□□□ 0.02
LRFN1Q9P244 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.19■□□□□ 0.02
LRFN1Q9P244 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRFN1Q9P244 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRFN1Q9P244 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRFN1Q9P244 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRFN1Q9P244 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LRFN1Q9P244 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRFN1Q9P244 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
LRFN1Q9P244 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRFN1Q9P244 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRFN1Q9P244 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRFN1Q9P244 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
LRFN1Q9P244 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRFN1Q9P244 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRFN1Q9P244 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRFN1Q9P244 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
LRFN1Q9P244 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRFN1Q9P244 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRFN1Q9P244 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LRFN1Q9P244 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LRFN1Q9P244 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LRFN1Q9P244 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
LRFN1Q9P244 BAD-202ENST00000394531 631 ntTSL 3 BASIC15.18■□□□□ 0.02
LRFN1Q9P244 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.18■□□□□ 0.02
LRFN1Q9P244 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC15.18■□□□□ 0.02
LRFN1Q9P244 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC15.18■□□□□ 0.02
LRFN1Q9P244 AC093214.1-201ENST00000511688 1107 ntBASIC15.18■□□□□ 0.02
LRFN1Q9P244 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC15.18■□□□□ 0.02
LRFN1Q9P244 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LRFN1Q9P244 BAD-207ENST00000544785 525 ntTSL 3 BASIC15.18■□□□□ 0.02
LRFN1Q9P244 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.18■□□□□ 0.02
LRFN1Q9P244 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC15.18■□□□□ 0.02
LRFN1Q9P244 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
LRFN1Q9P244 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.18■□□□□ 0.02
LRFN1Q9P244 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.18■□□□□ 0.02
LRFN1Q9P244 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
LRFN1Q9P244 AC073389.1-201ENST00000595595 795 ntBASIC15.18■□□□□ 0.02
LRFN1Q9P244 AL096865.1-201ENST00000606796 927 ntBASIC15.18■□□□□ 0.02
LRFN1Q9P244 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC15.18■□□□□ 0.02
LRFN1Q9P244 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRFN1Q9P244 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.18■□□□□ 0.02
LRFN1Q9P244 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
LRFN1Q9P244 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRFN1Q9P244 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
LRFN1Q9P244 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC15.18■□□□□ 0.02
LRFN1Q9P244 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRFN1Q9P244 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
LRFN1Q9P244 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRFN1Q9P244 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRFN1Q9P244 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRFN1Q9P244 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRFN1Q9P244 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRFN1Q9P244 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
LRFN1Q9P244 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
LRFN1Q9P244 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRFN1Q9P244 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
LRFN1Q9P244 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.17■□□□□ 0.02
LRFN1Q9P244 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LRFN1Q9P244 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC15.17■□□□□ 0.02
LRFN1Q9P244 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LRFN1Q9P244 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LRFN1Q9P244 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
LRFN1Q9P244 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRFN1Q9P244 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LRFN1Q9P244 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.17■□□□□ 0.02
LRFN1Q9P244 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
LRFN1Q9P244 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRFN1Q9P244 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
LRFN1Q9P244 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC15.17■□□□□ 0.02
LRFN1Q9P244 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRFN1Q9P244 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LRFN1Q9P244 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LRFN1Q9P244 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRFN1Q9P244 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.17■□□□□ 0.02
LRFN1Q9P244 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.17■□□□□ 0.02
LRFN1Q9P244 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRFN1Q9P244 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LRFN1Q9P244 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
LRFN1Q9P244 AC142381.1-201ENST00000426099 345 ntBASIC15.17■□□□□ 0.02
LRFN1Q9P244 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC15.17■□□□□ 0.02
LRFN1Q9P244 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.17■□□□□ 0.02
LRFN1Q9P244 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms