Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC13.83□□□□□ -0.19
LIN7CQ9NUP9 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
LIN7CQ9NUP9 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
LIN7CQ9NUP9 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC13.83□□□□□ -0.2
LIN7CQ9NUP9 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
LIN7CQ9NUP9 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC13.83□□□□□ -0.2
LIN7CQ9NUP9 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LIN7CQ9NUP9 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LIN7CQ9NUP9 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC13.83□□□□□ -0.2
LIN7CQ9NUP9 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LIN7CQ9NUP9 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC13.83□□□□□ -0.2
LIN7CQ9NUP9 AC079781.3-201ENST00000449110 356 ntBASIC13.83□□□□□ -0.2
LIN7CQ9NUP9 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
LIN7CQ9NUP9 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC13.83□□□□□ -0.2
LIN7CQ9NUP9 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC13.83□□□□□ -0.2
LIN7CQ9NUP9 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC13.83□□□□□ -0.2
LIN7CQ9NUP9 SART3-203ENST00000546611 1184 ntBASIC13.83□□□□□ -0.2
LIN7CQ9NUP9 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC13.83□□□□□ -0.2
LIN7CQ9NUP9 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
LIN7CQ9NUP9 COPE-211ENST00000600932 1144 ntTSL 5 BASIC13.83□□□□□ -0.2
LIN7CQ9NUP9 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC13.83□□□□□ -0.2
LIN7CQ9NUP9 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC13.83□□□□□ -0.2
LIN7CQ9NUP9 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LIN7CQ9NUP9 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LIN7CQ9NUP9 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LIN7CQ9NUP9 PC-204ENST00000524491 1714 ntTSL 2 BASIC13.83□□□□□ -0.2
LIN7CQ9NUP9 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC13.83□□□□□ -0.2
LIN7CQ9NUP9 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LIN7CQ9NUP9 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LIN7CQ9NUP9 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
LIN7CQ9NUP9 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LIN7CQ9NUP9 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LIN7CQ9NUP9 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC13.83□□□□□ -0.2
LIN7CQ9NUP9 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
LIN7CQ9NUP9 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LIN7CQ9NUP9 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
LIN7CQ9NUP9 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
LIN7CQ9NUP9 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LIN7CQ9NUP9 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LIN7CQ9NUP9 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC13.83□□□□□ -0.2
LIN7CQ9NUP9 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
LIN7CQ9NUP9 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LIN7CQ9NUP9 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC13.82□□□□□ -0.2
LIN7CQ9NUP9 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LIN7CQ9NUP9 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
LIN7CQ9NUP9 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LIN7CQ9NUP9 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LIN7CQ9NUP9 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC13.82□□□□□ -0.2
LIN7CQ9NUP9 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC13.82□□□□□ -0.2
LIN7CQ9NUP9 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC13.82□□□□□ -0.2
LIN7CQ9NUP9 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LIN7CQ9NUP9 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LIN7CQ9NUP9 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LIN7CQ9NUP9 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
LIN7CQ9NUP9 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC13.82□□□□□ -0.2
LIN7CQ9NUP9 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LIN7CQ9NUP9 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LIN7CQ9NUP9 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC13.82□□□□□ -0.2
LIN7CQ9NUP9 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC13.82□□□□□ -0.2
LIN7CQ9NUP9 RAB17-203ENST00000409576 466 ntTSL 3 BASIC13.82□□□□□ -0.2
LIN7CQ9NUP9 KRT18P67-201ENST00000432816 1264 ntBASIC13.82□□□□□ -0.2
LIN7CQ9NUP9 FAM197Y8-203ENST00000450145 560 ntBASIC13.82□□□□□ -0.2
LIN7CQ9NUP9 BX005266.1-201ENST00000473402 457 ntBASIC13.82□□□□□ -0.2
LIN7CQ9NUP9 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
LIN7CQ9NUP9 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC13.82□□□□□ -0.2
LIN7CQ9NUP9 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
LIN7CQ9NUP9 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC13.82□□□□□ -0.2
LIN7CQ9NUP9 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC13.82□□□□□ -0.2
LIN7CQ9NUP9 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC13.82□□□□□ -0.2
LIN7CQ9NUP9 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC13.82□□□□□ -0.2
LIN7CQ9NUP9 CALM3-211ENST00000598871 561 ntTSL 4 BASIC13.82□□□□□ -0.2
LIN7CQ9NUP9 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC13.82□□□□□ -0.2
LIN7CQ9NUP9 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC13.82□□□□□ -0.2
LIN7CQ9NUP9 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
LIN7CQ9NUP9 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
LIN7CQ9NUP9 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LIN7CQ9NUP9 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LIN7CQ9NUP9 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
LIN7CQ9NUP9 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
LIN7CQ9NUP9 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LIN7CQ9NUP9 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC13.82□□□□□ -0.2
LIN7CQ9NUP9 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC13.82□□□□□ -0.2
LIN7CQ9NUP9 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
LIN7CQ9NUP9 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LIN7CQ9NUP9 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LIN7CQ9NUP9 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC13.82□□□□□ -0.2
LIN7CQ9NUP9 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LIN7CQ9NUP9 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LIN7CQ9NUP9 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC13.82□□□□□ -0.2
LIN7CQ9NUP9 AC006277.1-201ENST00000624348 1610 ntBASIC13.82□□□□□ -0.2
LIN7CQ9NUP9 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LIN7CQ9NUP9 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LIN7CQ9NUP9 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LIN7CQ9NUP9 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LIN7CQ9NUP9 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LIN7CQ9NUP9 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LIN7CQ9NUP9 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
LIN7CQ9NUP9 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
LIN7CQ9NUP9 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
LIN7CQ9NUP9 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms