Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
TRMT13Q9NUP7 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRMT13Q9NUP7 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
TRMT13Q9NUP7 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRMT13Q9NUP7 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC18.02■□□□□ 0.48
TRMT13Q9NUP7 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.02■□□□□ 0.48
TRMT13Q9NUP7 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TRMT13Q9NUP7 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
TRMT13Q9NUP7 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TRMT13Q9NUP7 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRMT13Q9NUP7 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
TRMT13Q9NUP7 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.02■□□□□ 0.48
TRMT13Q9NUP7 MIR658-201ENST00000385210 100 ntBASIC18.02■□□□□ 0.48
TRMT13Q9NUP7 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.02■□□□□ 0.48
TRMT13Q9NUP7 SPDYE17-201ENST00000412399 783 ntBASIC18.02■□□□□ 0.48
TRMT13Q9NUP7 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC18.02■□□□□ 0.48
TRMT13Q9NUP7 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
TRMT13Q9NUP7 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TRMT13Q9NUP7 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC18.02■□□□□ 0.48
TRMT13Q9NUP7 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TRMT13Q9NUP7 MYCLP2-201ENST00000449268 967 ntBASIC18.02■□□□□ 0.48
TRMT13Q9NUP7 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC18.02■□□□□ 0.48
TRMT13Q9NUP7 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRMT13Q9NUP7 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
TRMT13Q9NUP7 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
TRMT13Q9NUP7 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC18.02■□□□□ 0.48
TRMT13Q9NUP7 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC18.02■□□□□ 0.48
TRMT13Q9NUP7 RAB43P1-201ENST00000561790 589 ntBASIC18.02■□□□□ 0.48
TRMT13Q9NUP7 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC18.02■□□□□ 0.48
TRMT13Q9NUP7 CTBP2P3-201ENST00000585629 1255 ntBASIC18.02■□□□□ 0.48
TRMT13Q9NUP7 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
TRMT13Q9NUP7 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC18.02■□□□□ 0.48
TRMT13Q9NUP7 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC18.02■□□□□ 0.48
TRMT13Q9NUP7 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC18.02■□□□□ 0.48
TRMT13Q9NUP7 MIR6805-201ENST00000615055 62 ntBASIC18.02■□□□□ 0.48
TRMT13Q9NUP7 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC18.02■□□□□ 0.48
TRMT13Q9NUP7 AC007613.1-201ENST00000572811 2597 ntBASIC18.02■□□□□ 0.47
TRMT13Q9NUP7 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
TRMT13Q9NUP7 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
TRMT13Q9NUP7 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.02■□□□□ 0.47
TRMT13Q9NUP7 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
TRMT13Q9NUP7 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.47
TRMT13Q9NUP7 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC18.02■□□□□ 0.47
TRMT13Q9NUP7 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
TRMT13Q9NUP7 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.01■□□□□ 0.47
TRMT13Q9NUP7 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRMT13Q9NUP7 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.01■□□□□ 0.47
TRMT13Q9NUP7 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC18.01■□□□□ 0.47
TRMT13Q9NUP7 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRMT13Q9NUP7 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRMT13Q9NUP7 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC18.01■□□□□ 0.47
TRMT13Q9NUP7 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRMT13Q9NUP7 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.01■□□□□ 0.47
TRMT13Q9NUP7 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC18.01■□□□□ 0.47
TRMT13Q9NUP7 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRMT13Q9NUP7 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
TRMT13Q9NUP7 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRMT13Q9NUP7 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
TRMT13Q9NUP7 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC18.01■□□□□ 0.47
TRMT13Q9NUP7 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRMT13Q9NUP7 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC18.01■□□□□ 0.47
TRMT13Q9NUP7 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
TRMT13Q9NUP7 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC18.01■□□□□ 0.47
TRMT13Q9NUP7 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC18.01■□□□□ 0.47
TRMT13Q9NUP7 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRMT13Q9NUP7 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC18.01■□□□□ 0.47
TRMT13Q9NUP7 SDHAP3-202ENST00000515467 728 ntBASIC18.01■□□□□ 0.47
TRMT13Q9NUP7 GLI4-203ENST00000517468 963 ntTSL 5 BASIC18.01■□□□□ 0.47
TRMT13Q9NUP7 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC18.01■□□□□ 0.47
TRMT13Q9NUP7 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC18.01■□□□□ 0.47
TRMT13Q9NUP7 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRMT13Q9NUP7 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC18.01■□□□□ 0.47
TRMT13Q9NUP7 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC18.01■□□□□ 0.47
TRMT13Q9NUP7 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC18.01■□□□□ 0.47
TRMT13Q9NUP7 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC18.01■□□□□ 0.47
TRMT13Q9NUP7 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC18.01■□□□□ 0.47
TRMT13Q9NUP7 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
TRMT13Q9NUP7 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRMT13Q9NUP7 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRMT13Q9NUP7 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRMT13Q9NUP7 AL645728.1-201ENST00000366221 2101 ntBASIC18.01■□□□□ 0.47
TRMT13Q9NUP7 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
TRMT13Q9NUP7 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRMT13Q9NUP7 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18■□□□□ 0.47
TRMT13Q9NUP7 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC18■□□□□ 0.47
TRMT13Q9NUP7 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRMT13Q9NUP7 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRMT13Q9NUP7 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18■□□□□ 0.47
TRMT13Q9NUP7 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRMT13Q9NUP7 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRMT13Q9NUP7 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRMT13Q9NUP7 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18■□□□□ 0.47
TRMT13Q9NUP7 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
TRMT13Q9NUP7 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
TRMT13Q9NUP7 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRMT13Q9NUP7 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRMT13Q9NUP7 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
TRMT13Q9NUP7 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
TRMT13Q9NUP7 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC18■□□□□ 0.47
TRMT13Q9NUP7 TTTY23B-201ENST00000442790 549 ntBASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms