Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BLOC1S4Q9NUP1 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BLOC1S4Q9NUP1 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC18.36■□□□□ 0.53
BLOC1S4Q9NUP1 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.36■□□□□ 0.53
BLOC1S4Q9NUP1 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
BLOC1S4Q9NUP1 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
BLOC1S4Q9NUP1 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
BLOC1S4Q9NUP1 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC18.35■□□□□ 0.53
BLOC1S4Q9NUP1 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
BLOC1S4Q9NUP1 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
BLOC1S4Q9NUP1 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC18.35■□□□□ 0.53
BLOC1S4Q9NUP1 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC18.35■□□□□ 0.53
BLOC1S4Q9NUP1 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BLOC1S4Q9NUP1 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BLOC1S4Q9NUP1 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
BLOC1S4Q9NUP1 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC18.35■□□□□ 0.53
BLOC1S4Q9NUP1 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
BLOC1S4Q9NUP1 BSG-215ENST00000618006 1329 ntTSL 2 BASIC18.35■□□□□ 0.53
BLOC1S4Q9NUP1 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BLOC1S4Q9NUP1 AL671277.1-201ENST00000429656 993 ntBASIC18.35■□□□□ 0.53
BLOC1S4Q9NUP1 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC18.35■□□□□ 0.53
BLOC1S4Q9NUP1 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC18.35■□□□□ 0.53
BLOC1S4Q9NUP1 AL135744.1-201ENST00000565098 629 ntBASIC18.35■□□□□ 0.53
BLOC1S4Q9NUP1 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC18.35■□□□□ 0.53
BLOC1S4Q9NUP1 MTDHP5-201ENST00000598980 586 ntBASIC18.35■□□□□ 0.53
BLOC1S4Q9NUP1 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC18.35■□□□□ 0.53
BLOC1S4Q9NUP1 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
BLOC1S4Q9NUP1 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC18.35■□□□□ 0.53
BLOC1S4Q9NUP1 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
BLOC1S4Q9NUP1 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BLOC1S4Q9NUP1 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BLOC1S4Q9NUP1 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BLOC1S4Q9NUP1 PCDHA1-201ENST00000378133 2726 ntBASIC18.35■□□□□ 0.53
BLOC1S4Q9NUP1 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
BLOC1S4Q9NUP1 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BLOC1S4Q9NUP1 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
BLOC1S4Q9NUP1 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC18.34■□□□□ 0.53
BLOC1S4Q9NUP1 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
BLOC1S4Q9NUP1 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
BLOC1S4Q9NUP1 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BLOC1S4Q9NUP1 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC18.34■□□□□ 0.53
BLOC1S4Q9NUP1 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC18.34■□□□□ 0.53
BLOC1S4Q9NUP1 FOXO1B-201ENST00000504678 1527 ntBASIC18.34■□□□□ 0.53
BLOC1S4Q9NUP1 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BLOC1S4Q9NUP1 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BLOC1S4Q9NUP1 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BLOC1S4Q9NUP1 AL513523.2-202ENST00000427283 2040 ntBASIC18.34■□□□□ 0.53
BLOC1S4Q9NUP1 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
BLOC1S4Q9NUP1 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BLOC1S4Q9NUP1 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BLOC1S4Q9NUP1 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BLOC1S4Q9NUP1 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
BLOC1S4Q9NUP1 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
BLOC1S4Q9NUP1 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BLOC1S4Q9NUP1 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
BLOC1S4Q9NUP1 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC18.34■□□□□ 0.53
BLOC1S4Q9NUP1 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
BLOC1S4Q9NUP1 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BLOC1S4Q9NUP1 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC18.34■□□□□ 0.53
BLOC1S4Q9NUP1 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
BLOC1S4Q9NUP1 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BLOC1S4Q9NUP1 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
BLOC1S4Q9NUP1 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC18.34■□□□□ 0.53
BLOC1S4Q9NUP1 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BLOC1S4Q9NUP1 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC18.34■□□□□ 0.53
BLOC1S4Q9NUP1 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
BLOC1S4Q9NUP1 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
BLOC1S4Q9NUP1 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
BLOC1S4Q9NUP1 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
BLOC1S4Q9NUP1 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.34■□□□□ 0.53
BLOC1S4Q9NUP1 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC18.34■□□□□ 0.53
BLOC1S4Q9NUP1 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BLOC1S4Q9NUP1 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BLOC1S4Q9NUP1 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC18.34■□□□□ 0.53
BLOC1S4Q9NUP1 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
BLOC1S4Q9NUP1 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC18.34■□□□□ 0.53
BLOC1S4Q9NUP1 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
BLOC1S4Q9NUP1 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
BLOC1S4Q9NUP1 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
BLOC1S4Q9NUP1 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC18.33■□□□□ 0.53
BLOC1S4Q9NUP1 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
BLOC1S4Q9NUP1 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC18.33■□□□□ 0.53
BLOC1S4Q9NUP1 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
BLOC1S4Q9NUP1 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
BLOC1S4Q9NUP1 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
BLOC1S4Q9NUP1 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.53
BLOC1S4Q9NUP1 AKAP8P1-201ENST00000434743 1349 ntBASIC18.33■□□□□ 0.53
BLOC1S4Q9NUP1 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
BLOC1S4Q9NUP1 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC18.33■□□□□ 0.53
BLOC1S4Q9NUP1 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
BLOC1S4Q9NUP1 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
BLOC1S4Q9NUP1 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
BLOC1S4Q9NUP1 NEK7-201ENST00000367383 586 ntTSL 2 BASIC18.33■□□□□ 0.52
BLOC1S4Q9NUP1 TFAMP1-201ENST00000412727 736 ntBASIC18.33■□□□□ 0.52
BLOC1S4Q9NUP1 COX10-202ENST00000429152 875 ntTSL 2 BASIC18.33■□□□□ 0.52
BLOC1S4Q9NUP1 HTR5BP-201ENST00000430851 1154 ntBASIC18.33■□□□□ 0.52
BLOC1S4Q9NUP1 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC18.33■□□□□ 0.52
BLOC1S4Q9NUP1 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC18.33■□□□□ 0.52
BLOC1S4Q9NUP1 AC243562.1-201ENST00000560672 389 ntBASIC18.33■□□□□ 0.52
BLOC1S4Q9NUP1 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms