Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TLR9Q9NR96 AL162274.1-201ENST00000617191 1098 ntBASIC17.46■□□□□ 0.39
TLR9Q9NR96 AL591163.1-201ENST00000641757 987 ntBASIC17.46■□□□□ 0.39
TLR9Q9NR96 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
TLR9Q9NR96 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
TLR9Q9NR96 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TLR9Q9NR96 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TLR9Q9NR96 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TLR9Q9NR96 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.46■□□□□ 0.39
TLR9Q9NR96 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TLR9Q9NR96 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.46■□□□□ 0.39
TLR9Q9NR96 KRT8P39-201ENST00000396270 1433 ntBASIC17.46■□□□□ 0.39
TLR9Q9NR96 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
TLR9Q9NR96 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
TLR9Q9NR96 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.38
TLR9Q9NR96 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.45■□□□□ 0.38
TLR9Q9NR96 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TLR9Q9NR96 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TLR9Q9NR96 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TLR9Q9NR96 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TLR9Q9NR96 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.45■□□□□ 0.38
TLR9Q9NR96 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
TLR9Q9NR96 CD81-207ENST00000481687 890 ntTSL 2 BASIC17.45■□□□□ 0.38
TLR9Q9NR96 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC17.45■□□□□ 0.38
TLR9Q9NR96 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.45■□□□□ 0.38
TLR9Q9NR96 AC044860.1-202ENST00000559481 777 ntBASIC17.45■□□□□ 0.38
TLR9Q9NR96 AC004790.1-201ENST00000612686 536 ntBASIC17.45■□□□□ 0.38
TLR9Q9NR96 AC007431.3-201ENST00000623221 587 ntBASIC17.45■□□□□ 0.38
TLR9Q9NR96 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TLR9Q9NR96 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TLR9Q9NR96 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TLR9Q9NR96 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.45■□□□□ 0.38
TLR9Q9NR96 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TLR9Q9NR96 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TLR9Q9NR96 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.45■□□□□ 0.38
TLR9Q9NR96 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC17.45■□□□□ 0.38
TLR9Q9NR96 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.45■□□□□ 0.38
TLR9Q9NR96 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.45■□□□□ 0.38
TLR9Q9NR96 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
TLR9Q9NR96 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TLR9Q9NR96 PCDHA12-202ENST00000613593 2588 ntBASIC17.44■□□□□ 0.38
TLR9Q9NR96 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TLR9Q9NR96 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TLR9Q9NR96 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TLR9Q9NR96 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TLR9Q9NR96 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TLR9Q9NR96 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.44■□□□□ 0.38
TLR9Q9NR96 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TLR9Q9NR96 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TLR9Q9NR96 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC17.44■□□□□ 0.38
TLR9Q9NR96 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
TLR9Q9NR96 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TLR9Q9NR96 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TLR9Q9NR96 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TLR9Q9NR96 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC17.44■□□□□ 0.38
TLR9Q9NR96 ACA64.2-201ENST00000459014 129 ntBASIC17.44■□□□□ 0.38
TLR9Q9NR96 RAB35-202ENST00000534951 939 ntTSL 2 BASIC17.44■□□□□ 0.38
TLR9Q9NR96 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC17.44■□□□□ 0.38
TLR9Q9NR96 NAA38-207ENST00000576861 556 ntTSL 3 BASIC17.44■□□□□ 0.38
TLR9Q9NR96 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC17.44■□□□□ 0.38
TLR9Q9NR96 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.44■□□□□ 0.38
TLR9Q9NR96 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.44■□□□□ 0.38
TLR9Q9NR96 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.44■□□□□ 0.38
TLR9Q9NR96 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TLR9Q9NR96 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
TLR9Q9NR96 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TLR9Q9NR96 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC17.44■□□□□ 0.38
TLR9Q9NR96 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.44■□□□□ 0.38
TLR9Q9NR96 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TLR9Q9NR96 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.44■□□□□ 0.38
TLR9Q9NR96 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TLR9Q9NR96 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
TLR9Q9NR96 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
TLR9Q9NR96 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TLR9Q9NR96 AL023806.1-201ENST00000603994 1649 ntBASIC17.43■□□□□ 0.38
TLR9Q9NR96 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TLR9Q9NR96 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TLR9Q9NR96 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TLR9Q9NR96 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TLR9Q9NR96 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.43■□□□□ 0.38
TLR9Q9NR96 SLC7A15P-201ENST00000424028 1363 ntBASIC17.43■□□□□ 0.38
TLR9Q9NR96 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TLR9Q9NR96 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
TLR9Q9NR96 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.43■□□□□ 0.38
TLR9Q9NR96 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
TLR9Q9NR96 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TLR9Q9NR96 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.43■□□□□ 0.38
TLR9Q9NR96 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
TLR9Q9NR96 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TLR9Q9NR96 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TLR9Q9NR96 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TLR9Q9NR96 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TLR9Q9NR96 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
TLR9Q9NR96 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC17.43■□□□□ 0.38
TLR9Q9NR96 AC114501.2-201ENST00000439631 535 ntBASIC17.43■□□□□ 0.38
TLR9Q9NR96 SPDYE18-201ENST00000510091 1050 ntBASIC17.43■□□□□ 0.38
TLR9Q9NR96 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC17.43■□□□□ 0.38
TLR9Q9NR96 AC055876.2-201ENST00000531834 546 ntBASIC17.43■□□□□ 0.38
TLR9Q9NR96 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
TLR9Q9NR96 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms