Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
GCM1Q9NP62 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
GCM1Q9NP62 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
GCM1Q9NP62 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.18□□□□□ -0.14
GCM1Q9NP62 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC14.18□□□□□ -0.14
GCM1Q9NP62 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC14.18□□□□□ -0.14
GCM1Q9NP62 AC092865.5-201ENST00000545435 363 ntBASIC14.18□□□□□ -0.14
GCM1Q9NP62 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC14.18□□□□□ -0.14
GCM1Q9NP62 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC14.18□□□□□ -0.14
GCM1Q9NP62 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
GCM1Q9NP62 AC068137.2-201ENST00000605408 478 ntBASIC14.18□□□□□ -0.14
GCM1Q9NP62 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
GCM1Q9NP62 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
GCM1Q9NP62 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC14.18□□□□□ -0.14
GCM1Q9NP62 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.18□□□□□ -0.14
GCM1Q9NP62 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
GCM1Q9NP62 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
GCM1Q9NP62 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
GCM1Q9NP62 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
GCM1Q9NP62 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
GCM1Q9NP62 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
GCM1Q9NP62 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
GCM1Q9NP62 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GCM1Q9NP62 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
GCM1Q9NP62 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.18□□□□□ -0.14
GCM1Q9NP62 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC14.18□□□□□ -0.14
GCM1Q9NP62 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GCM1Q9NP62 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC14.18□□□□□ -0.14
GCM1Q9NP62 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
GCM1Q9NP62 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC14.18□□□□□ -0.14
GCM1Q9NP62 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
GCM1Q9NP62 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GCM1Q9NP62 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GCM1Q9NP62 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
GCM1Q9NP62 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
GCM1Q9NP62 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GCM1Q9NP62 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GCM1Q9NP62 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
GCM1Q9NP62 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
GCM1Q9NP62 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
GCM1Q9NP62 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC14.17□□□□□ -0.14
GCM1Q9NP62 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC14.17□□□□□ -0.14
GCM1Q9NP62 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
GCM1Q9NP62 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
GCM1Q9NP62 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
GCM1Q9NP62 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC14.17□□□□□ -0.14
GCM1Q9NP62 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
GCM1Q9NP62 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC14.17□□□□□ -0.14
GCM1Q9NP62 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.17□□□□□ -0.14
GCM1Q9NP62 AC140658.5-201ENST00000438532 169 ntBASIC14.17□□□□□ -0.14
GCM1Q9NP62 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC14.17□□□□□ -0.14
GCM1Q9NP62 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
GCM1Q9NP62 THTPA-204ENST00000554970 569 ntTSL 4 BASIC14.17□□□□□ -0.14
GCM1Q9NP62 THTPA-206ENST00000556015 535 ntTSL 3 BASIC14.17□□□□□ -0.14
GCM1Q9NP62 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC14.17□□□□□ -0.14
GCM1Q9NP62 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14.17□□□□□ -0.14
GCM1Q9NP62 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.17□□□□□ -0.14
GCM1Q9NP62 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
GCM1Q9NP62 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
GCM1Q9NP62 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
GCM1Q9NP62 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC14.17□□□□□ -0.14
GCM1Q9NP62 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
GCM1Q9NP62 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
GCM1Q9NP62 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
GCM1Q9NP62 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
GCM1Q9NP62 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
GCM1Q9NP62 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
GCM1Q9NP62 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC14.17□□□□□ -0.14
GCM1Q9NP62 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
GCM1Q9NP62 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GCM1Q9NP62 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GCM1Q9NP62 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GCM1Q9NP62 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
GCM1Q9NP62 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
GCM1Q9NP62 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GCM1Q9NP62 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
GCM1Q9NP62 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GCM1Q9NP62 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
GCM1Q9NP62 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
GCM1Q9NP62 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GCM1Q9NP62 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC14.16□□□□□ -0.14
GCM1Q9NP62 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
GCM1Q9NP62 AC092919.2-201ENST00000623631 1645 ntBASIC14.16□□□□□ -0.14
GCM1Q9NP62 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GCM1Q9NP62 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GCM1Q9NP62 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GCM1Q9NP62 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GCM1Q9NP62 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
GCM1Q9NP62 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC14.16□□□□□ -0.14
GCM1Q9NP62 STARD13-205ENST00000439831 945 ntTSL 2 BASIC14.16□□□□□ -0.14
GCM1Q9NP62 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.16□□□□□ -0.14
GCM1Q9NP62 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC14.16□□□□□ -0.14
GCM1Q9NP62 MIR3687-2-201ENST00000577708 61 ntBASIC14.16□□□□□ -0.14
GCM1Q9NP62 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC14.16□□□□□ -0.14
GCM1Q9NP62 MIR3687-1-201ENST00000614492 61 ntBASIC14.16□□□□□ -0.14
GCM1Q9NP62 AC023511.2-201ENST00000618803 211 ntBASIC14.16□□□□□ -0.14
GCM1Q9NP62 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.16□□□□□ -0.14
GCM1Q9NP62 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GCM1Q9NP62 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GCM1Q9NP62 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms