Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CBX8Q9HC52 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CBX8Q9HC52 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.53■□□□□ 0.56
CBX8Q9HC52 AP002383.4-201ENST00000442518 975 ntBASIC18.53■□□□□ 0.56
CBX8Q9HC52 PAWRP1-201ENST00000451083 565 ntBASIC18.53■□□□□ 0.56
CBX8Q9HC52 DUX4L26-201ENST00000489078 1255 ntBASIC18.53■□□□□ 0.56
CBX8Q9HC52 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CBX8Q9HC52 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
CBX8Q9HC52 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.53■□□□□ 0.56
CBX8Q9HC52 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.53■□□□□ 0.56
CBX8Q9HC52 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.53■□□□□ 0.56
CBX8Q9HC52 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.53■□□□□ 0.56
CBX8Q9HC52 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
CBX8Q9HC52 REXO1L3P-201ENST00000622202 1288 ntBASIC18.53■□□□□ 0.56
CBX8Q9HC52 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CBX8Q9HC52 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC18.53■□□□□ 0.56
CBX8Q9HC52 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC18.53■□□□□ 0.56
CBX8Q9HC52 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CBX8Q9HC52 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC18.53■□□□□ 0.56
CBX8Q9HC52 AC006058.4-201ENST00000624016 1670 ntBASIC18.53■□□□□ 0.56
CBX8Q9HC52 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
CBX8Q9HC52 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC18.53■□□□□ 0.56
CBX8Q9HC52 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CBX8Q9HC52 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC18.53■□□□□ 0.56
CBX8Q9HC52 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CBX8Q9HC52 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
CBX8Q9HC52 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CBX8Q9HC52 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CBX8Q9HC52 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CBX8Q9HC52 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CBX8Q9HC52 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CBX8Q9HC52 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CBX8Q9HC52 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CBX8Q9HC52 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CBX8Q9HC52 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CBX8Q9HC52 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
CBX8Q9HC52 RCN1P1-201ENST00000400413 996 ntBASIC18.52■□□□□ 0.56
CBX8Q9HC52 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CBX8Q9HC52 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CBX8Q9HC52 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CBX8Q9HC52 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.52■□□□□ 0.56
CBX8Q9HC52 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.52■□□□□ 0.56
CBX8Q9HC52 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CBX8Q9HC52 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.52■□□□□ 0.56
CBX8Q9HC52 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.55
CBX8Q9HC52 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
CBX8Q9HC52 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CBX8Q9HC52 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CBX8Q9HC52 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CBX8Q9HC52 AC131009.4-201ENST00000624048 1740 ntBASIC18.52■□□□□ 0.55
CBX8Q9HC52 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CBX8Q9HC52 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CBX8Q9HC52 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.51■□□□□ 0.55
CBX8Q9HC52 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC18.51■□□□□ 0.55
CBX8Q9HC52 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CBX8Q9HC52 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CBX8Q9HC52 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CBX8Q9HC52 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CBX8Q9HC52 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CBX8Q9HC52 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CBX8Q9HC52 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC18.51■□□□□ 0.55
CBX8Q9HC52 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.51■□□□□ 0.55
CBX8Q9HC52 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CBX8Q9HC52 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
CBX8Q9HC52 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC18.51■□□□□ 0.55
CBX8Q9HC52 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CBX8Q9HC52 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CBX8Q9HC52 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
CBX8Q9HC52 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CBX8Q9HC52 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.51■□□□□ 0.55
CBX8Q9HC52 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.51■□□□□ 0.55
CBX8Q9HC52 BX005266.1-201ENST00000473402 457 ntBASIC18.51■□□□□ 0.55
CBX8Q9HC52 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.51■□□□□ 0.55
CBX8Q9HC52 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.51■□□□□ 0.55
CBX8Q9HC52 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.51■□□□□ 0.55
CBX8Q9HC52 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.51■□□□□ 0.55
CBX8Q9HC52 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.51■□□□□ 0.55
CBX8Q9HC52 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.51■□□□□ 0.55
CBX8Q9HC52 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.51■□□□□ 0.55
CBX8Q9HC52 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CBX8Q9HC52 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CBX8Q9HC52 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CBX8Q9HC52 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CBX8Q9HC52 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CBX8Q9HC52 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CBX8Q9HC52 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC18.51■□□□□ 0.55
CBX8Q9HC52 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CBX8Q9HC52 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CBX8Q9HC52 SLC22A20-204ENST00000530038 1673 ntBASIC18.5■□□□□ 0.55
CBX8Q9HC52 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CBX8Q9HC52 AC005332.1-201ENST00000577698 1310 ntBASIC18.5■□□□□ 0.55
CBX8Q9HC52 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
CBX8Q9HC52 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC18.5■□□□□ 0.55
CBX8Q9HC52 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CBX8Q9HC52 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CBX8Q9HC52 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC18.5■□□□□ 0.55
CBX8Q9HC52 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CBX8Q9HC52 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CBX8Q9HC52 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CBX8Q9HC52 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms