Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CNTNAP4Q9C0A0 MIR1908-201ENST00000410394 80 ntBASIC20.54■□□□□ 0.88
CNTNAP4Q9C0A0 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CNTNAP4Q9C0A0 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC20.54■□□□□ 0.88
CNTNAP4Q9C0A0 AL583810.1-201ENST00000553344 1045 ntBASIC20.54■□□□□ 0.88
CNTNAP4Q9C0A0 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CNTNAP4Q9C0A0 TECR-220ENST00000600083 1204 ntTSL 2 BASIC20.54■□□□□ 0.88
CNTNAP4Q9C0A0 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CNTNAP4Q9C0A0 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CNTNAP4Q9C0A0 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC20.54■□□□□ 0.88
CNTNAP4Q9C0A0 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CNTNAP4Q9C0A0 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CNTNAP4Q9C0A0 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CNTNAP4Q9C0A0 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CNTNAP4Q9C0A0 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CNTNAP4Q9C0A0 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CNTNAP4Q9C0A0 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC20.54■□□□□ 0.88
CNTNAP4Q9C0A0 AMT-206ENST00000458307 1860 ntTSL 2 BASIC20.54■□□□□ 0.88
CNTNAP4Q9C0A0 PCGF3-213ENST00000620529 1899 ntBASIC20.54■□□□□ 0.88
CNTNAP4Q9C0A0 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CNTNAP4Q9C0A0 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CNTNAP4Q9C0A0 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CNTNAP4Q9C0A0 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC20.54■□□□□ 0.88
CNTNAP4Q9C0A0 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CNTNAP4Q9C0A0 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CNTNAP4Q9C0A0 AC093525.8-201ENST00000624099 1342 ntBASIC20.54■□□□□ 0.88
CNTNAP4Q9C0A0 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.54■□□□□ 0.88
CNTNAP4Q9C0A0 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC20.54■□□□□ 0.88
CNTNAP4Q9C0A0 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CNTNAP4Q9C0A0 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
CNTNAP4Q9C0A0 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CNTNAP4Q9C0A0 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CNTNAP4Q9C0A0 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
CNTNAP4Q9C0A0 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CNTNAP4Q9C0A0 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CNTNAP4Q9C0A0 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC20.53■□□□□ 0.88
CNTNAP4Q9C0A0 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CNTNAP4Q9C0A0 RPL13P2-201ENST00000440687 659 ntBASIC20.53■□□□□ 0.88
CNTNAP4Q9C0A0 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CNTNAP4Q9C0A0 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC20.53■□□□□ 0.88
CNTNAP4Q9C0A0 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC20.53■□□□□ 0.88
CNTNAP4Q9C0A0 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CNTNAP4Q9C0A0 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC20.53■□□□□ 0.88
CNTNAP4Q9C0A0 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC20.53■□□□□ 0.88
CNTNAP4Q9C0A0 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC20.53■□□□□ 0.88
CNTNAP4Q9C0A0 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC20.53■□□□□ 0.88
CNTNAP4Q9C0A0 SLC25A47P1-201ENST00000531577 414 ntBASIC20.53■□□□□ 0.88
CNTNAP4Q9C0A0 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CNTNAP4Q9C0A0 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
CNTNAP4Q9C0A0 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC20.53■□□□□ 0.88
CNTNAP4Q9C0A0 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC20.53■□□□□ 0.88
CNTNAP4Q9C0A0 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CNTNAP4Q9C0A0 AC006538.1-201ENST00000567905 1585 ntBASIC20.53■□□□□ 0.88
CNTNAP4Q9C0A0 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CNTNAP4Q9C0A0 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CNTNAP4Q9C0A0 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
CNTNAP4Q9C0A0 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CNTNAP4Q9C0A0 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CNTNAP4Q9C0A0 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CNTNAP4Q9C0A0 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC20.53■□□□□ 0.88
CNTNAP4Q9C0A0 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC20.53■□□□□ 0.88
CNTNAP4Q9C0A0 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CNTNAP4Q9C0A0 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CNTNAP4Q9C0A0 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CNTNAP4Q9C0A0 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CNTNAP4Q9C0A0 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CNTNAP4Q9C0A0 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CNTNAP4Q9C0A0 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC20.53■□□□□ 0.88
CNTNAP4Q9C0A0 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CNTNAP4Q9C0A0 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CNTNAP4Q9C0A0 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CNTNAP4Q9C0A0 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC20.53■□□□□ 0.88
CNTNAP4Q9C0A0 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
CNTNAP4Q9C0A0 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CNTNAP4Q9C0A0 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CNTNAP4Q9C0A0 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC20.53■□□□□ 0.88
CNTNAP4Q9C0A0 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CNTNAP4Q9C0A0 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC20.53■□□□□ 0.88
CNTNAP4Q9C0A0 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
CNTNAP4Q9C0A0 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CNTNAP4Q9C0A0 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CNTNAP4Q9C0A0 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC20.53■□□□□ 0.88
CNTNAP4Q9C0A0 CTBP2P5-201ENST00000454986 1264 ntBASIC20.53■□□□□ 0.88
CNTNAP4Q9C0A0 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC20.53■□□□□ 0.88
CNTNAP4Q9C0A0 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC20.53■□□□□ 0.88
CNTNAP4Q9C0A0 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC20.53■□□□□ 0.88
CNTNAP4Q9C0A0 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC20.53■□□□□ 0.88
CNTNAP4Q9C0A0 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CNTNAP4Q9C0A0 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CNTNAP4Q9C0A0 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
CNTNAP4Q9C0A0 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CNTNAP4Q9C0A0 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC20.52■□□□□ 0.88
CNTNAP4Q9C0A0 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
CNTNAP4Q9C0A0 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CNTNAP4Q9C0A0 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CNTNAP4Q9C0A0 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
CNTNAP4Q9C0A0 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CNTNAP4Q9C0A0 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CNTNAP4Q9C0A0 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CNTNAP4Q9C0A0 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms