Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 AL031055.1-201ENST00000606362 631 ntBASIC15.17■□□□□ 0.02
RSPO3Q9BXY4 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.17■□□□□ 0.02
RSPO3Q9BXY4 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.17■□□□□ 0.02
RSPO3Q9BXY4 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.17■□□□□ 0.02
RSPO3Q9BXY4 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.17■□□□□ 0.02
RSPO3Q9BXY4 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.17■□□□□ 0.02
RSPO3Q9BXY4 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.17■□□□□ 0.02
RSPO3Q9BXY4 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
RSPO3Q9BXY4 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RSPO3Q9BXY4 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RSPO3Q9BXY4 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RSPO3Q9BXY4 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.17■□□□□ 0.02
RSPO3Q9BXY4 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.17■□□□□ 0.02
RSPO3Q9BXY4 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
RSPO3Q9BXY4 HLA-A-201ENST00000376802 1334 ntBASIC15.17■□□□□ 0.02
RSPO3Q9BXY4 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
RSPO3Q9BXY4 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.17■□□□□ 0.02
RSPO3Q9BXY4 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
RSPO3Q9BXY4 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RSPO3Q9BXY4 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
RSPO3Q9BXY4 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RSPO3Q9BXY4 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RSPO3Q9BXY4 AC016027.1-202ENST00000607927 1699 ntBASIC15.16■□□□□ 0.02
RSPO3Q9BXY4 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RSPO3Q9BXY4 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RSPO3Q9BXY4 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
RSPO3Q9BXY4 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RSPO3Q9BXY4 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.16■□□□□ 0.02
RSPO3Q9BXY4 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RSPO3Q9BXY4 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RSPO3Q9BXY4 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.16■□□□□ 0.02
RSPO3Q9BXY4 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.16■□□□□ 0.02
RSPO3Q9BXY4 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.16■□□□□ 0.02
RSPO3Q9BXY4 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RSPO3Q9BXY4 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
RSPO3Q9BXY4 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
RSPO3Q9BXY4 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
RSPO3Q9BXY4 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.16■□□□□ 0.02
RSPO3Q9BXY4 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
RSPO3Q9BXY4 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
RSPO3Q9BXY4 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.16■□□□□ 0.02
RSPO3Q9BXY4 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC15.16■□□□□ 0.02
RSPO3Q9BXY4 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC15.16■□□□□ 0.02
RSPO3Q9BXY4 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC15.16■□□□□ 0.02
RSPO3Q9BXY4 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.16■□□□□ 0.02
RSPO3Q9BXY4 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
RSPO3Q9BXY4 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.16■□□□□ 0.02
RSPO3Q9BXY4 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
RSPO3Q9BXY4 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.16■□□□□ 0.02
RSPO3Q9BXY4 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC15.16■□□□□ 0.02
RSPO3Q9BXY4 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC15.16■□□□□ 0.02
RSPO3Q9BXY4 AC010507.1-201ENST00000633895 436 ntBASIC15.16■□□□□ 0.02
RSPO3Q9BXY4 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC15.16■□□□□ 0.02
RSPO3Q9BXY4 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.16■□□□□ 0.02
RSPO3Q9BXY4 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RSPO3Q9BXY4 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
RSPO3Q9BXY4 AC013268.4-201ENST00000637413 2228 ntBASIC15.16■□□□□ 0.02
RSPO3Q9BXY4 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
RSPO3Q9BXY4 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
RSPO3Q9BXY4 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RSPO3Q9BXY4 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.16■□□□□ 0.02
RSPO3Q9BXY4 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RSPO3Q9BXY4 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.15■□□□□ 0.02
RSPO3Q9BXY4 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
RSPO3Q9BXY4 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
RSPO3Q9BXY4 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
RSPO3Q9BXY4 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RSPO3Q9BXY4 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RSPO3Q9BXY4 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.15■□□□□ 0.02
RSPO3Q9BXY4 PRAL-201ENST00000624952 3286 ntBASIC15.15■□□□□ 0.02
RSPO3Q9BXY4 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RSPO3Q9BXY4 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.15■□□□□ 0.02
RSPO3Q9BXY4 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
RSPO3Q9BXY4 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
RSPO3Q9BXY4 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.15■□□□□ 0.02
RSPO3Q9BXY4 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.15■□□□□ 0.02
RSPO3Q9BXY4 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
RSPO3Q9BXY4 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
RSPO3Q9BXY4 RPS2P28-201ENST00000314255 741 ntBASIC15.15■□□□□ 0.02
RSPO3Q9BXY4 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
RSPO3Q9BXY4 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.15■□□□□ 0.02
RSPO3Q9BXY4 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.15■□□□□ 0.02
RSPO3Q9BXY4 KRT18P2-201ENST00000447938 1258 ntBASIC15.15■□□□□ 0.02
RSPO3Q9BXY4 AL513480.1-201ENST00000451731 511 ntBASIC15.15■□□□□ 0.02
RSPO3Q9BXY4 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.15■□□□□ 0.02
RSPO3Q9BXY4 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
RSPO3Q9BXY4 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.15■□□□□ 0.02
RSPO3Q9BXY4 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.15■□□□□ 0.02
RSPO3Q9BXY4 AL031432.2-201ENST00000566714 459 ntBASIC15.15■□□□□ 0.02
RSPO3Q9BXY4 AL928711.1-201ENST00000570165 459 ntBASIC15.15■□□□□ 0.02
RSPO3Q9BXY4 MIR4751-201ENST00000578027 74 ntBASIC15.15■□□□□ 0.02
RSPO3Q9BXY4 MIR3909-201ENST00000579518 119 ntBASIC15.15■□□□□ 0.02
RSPO3Q9BXY4 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
RSPO3Q9BXY4 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
RSPO3Q9BXY4 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RSPO3Q9BXY4 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.15■□□□□ 0.02
RSPO3Q9BXY4 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RSPO3Q9BXY4 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RSPO3Q9BXY4 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RSPO3Q9BXY4 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms