Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
PDLIM5Q96HC4 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PDLIM5Q96HC4 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.16■□□□□ 0.18
PDLIM5Q96HC4 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.16■□□□□ 0.18
PDLIM5Q96HC4 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDLIM5Q96HC4 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDLIM5Q96HC4 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.16■□□□□ 0.18
PDLIM5Q96HC4 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.16■□□□□ 0.18
PDLIM5Q96HC4 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDLIM5Q96HC4 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
PDLIM5Q96HC4 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDLIM5Q96HC4 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
PDLIM5Q96HC4 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
PDLIM5Q96HC4 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PDLIM5Q96HC4 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PDLIM5Q96HC4 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PDLIM5Q96HC4 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PDLIM5Q96HC4 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDLIM5Q96HC4 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.16■□□□□ 0.18
PDLIM5Q96HC4 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
PDLIM5Q96HC4 BCAR1-209ENST00000546196 1340 ntBASIC16.16■□□□□ 0.18
PDLIM5Q96HC4 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDLIM5Q96HC4 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
PDLIM5Q96HC4 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDLIM5Q96HC4 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDLIM5Q96HC4 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
PDLIM5Q96HC4 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDLIM5Q96HC4 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDLIM5Q96HC4 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
PDLIM5Q96HC4 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PDLIM5Q96HC4 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
PDLIM5Q96HC4 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDLIM5Q96HC4 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.15■□□□□ 0.18
PDLIM5Q96HC4 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.15■□□□□ 0.18
PDLIM5Q96HC4 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDLIM5Q96HC4 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDLIM5Q96HC4 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
PDLIM5Q96HC4 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.15■□□□□ 0.18
PDLIM5Q96HC4 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.15■□□□□ 0.18
PDLIM5Q96HC4 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDLIM5Q96HC4 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDLIM5Q96HC4 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDLIM5Q96HC4 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
PDLIM5Q96HC4 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.15■□□□□ 0.18
PDLIM5Q96HC4 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.15■□□□□ 0.18
PDLIM5Q96HC4 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.15■□□□□ 0.18
PDLIM5Q96HC4 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.15■□□□□ 0.18
PDLIM5Q96HC4 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.15■□□□□ 0.18
PDLIM5Q96HC4 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.15■□□□□ 0.18
PDLIM5Q96HC4 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.15■□□□□ 0.18
PDLIM5Q96HC4 AL078644.1-201ENST00000609881 752 ntBASIC16.15■□□□□ 0.18
PDLIM5Q96HC4 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.15■□□□□ 0.18
PDLIM5Q96HC4 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.15■□□□□ 0.18
PDLIM5Q96HC4 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDLIM5Q96HC4 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.15■□□□□ 0.18
PDLIM5Q96HC4 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.15■□□□□ 0.18
PDLIM5Q96HC4 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDLIM5Q96HC4 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PDLIM5Q96HC4 AL603832.2-201ENST00000566195 2125 ntBASIC16.15■□□□□ 0.18
PDLIM5Q96HC4 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
PDLIM5Q96HC4 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
PDLIM5Q96HC4 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.18
PDLIM5Q96HC4 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.14■□□□□ 0.18
PDLIM5Q96HC4 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.14■□□□□ 0.17
PDLIM5Q96HC4 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDLIM5Q96HC4 ZNF259P1-201ENST00000407656 1365 ntBASIC16.14■□□□□ 0.17
PDLIM5Q96HC4 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDLIM5Q96HC4 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDLIM5Q96HC4 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDLIM5Q96HC4 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PDLIM5Q96HC4 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PDLIM5Q96HC4 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDLIM5Q96HC4 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDLIM5Q96HC4 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDLIM5Q96HC4 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.14■□□□□ 0.17
PDLIM5Q96HC4 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.14■□□□□ 0.17
PDLIM5Q96HC4 AL590627.1-203ENST00000421194 1026 ntBASIC16.14■□□□□ 0.17
PDLIM5Q96HC4 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
PDLIM5Q96HC4 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
PDLIM5Q96HC4 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.14■□□□□ 0.17
PDLIM5Q96HC4 AC093724.1-201ENST00000448659 1027 ntBASIC16.14■□□□□ 0.17
PDLIM5Q96HC4 KRT18P34-201ENST00000488218 1270 ntBASIC16.14■□□□□ 0.17
PDLIM5Q96HC4 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.14■□□□□ 0.17
PDLIM5Q96HC4 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
PDLIM5Q96HC4 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.14■□□□□ 0.17
PDLIM5Q96HC4 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDLIM5Q96HC4 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
PDLIM5Q96HC4 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDLIM5Q96HC4 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.14■□□□□ 0.17
PDLIM5Q96HC4 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDLIM5Q96HC4 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.14■□□□□ 0.17
PDLIM5Q96HC4 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.14■□□□□ 0.17
PDLIM5Q96HC4 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDLIM5Q96HC4 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.14■□□□□ 0.17
PDLIM5Q96HC4 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.13■□□□□ 0.17
PDLIM5Q96HC4 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.13■□□□□ 0.17
PDLIM5Q96HC4 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
PDLIM5Q96HC4 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.13■□□□□ 0.17
PDLIM5Q96HC4 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PDLIM5Q96HC4 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms