Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.74□□□□□ -0.05
RFT1Q96AA3 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.74□□□□□ -0.05
RFT1Q96AA3 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.74□□□□□ -0.05
RFT1Q96AA3 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
RFT1Q96AA3 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
RFT1Q96AA3 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
RFT1Q96AA3 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
RFT1Q96AA3 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RFT1Q96AA3 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RFT1Q96AA3 AL645728.1-201ENST00000366221 2101 ntBASIC14.74□□□□□ -0.05
RFT1Q96AA3 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RFT1Q96AA3 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.74□□□□□ -0.05
RFT1Q96AA3 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RFT1Q96AA3 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RFT1Q96AA3 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
RFT1Q96AA3 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
RFT1Q96AA3 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RFT1Q96AA3 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RFT1Q96AA3 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC14.74□□□□□ -0.05
RFT1Q96AA3 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC14.74□□□□□ -0.05
RFT1Q96AA3 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC14.74□□□□□ -0.05
RFT1Q96AA3 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC14.74□□□□□ -0.05
RFT1Q96AA3 AC087388.1-201ENST00000571370 1112 ntBASIC14.74□□□□□ -0.05
RFT1Q96AA3 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
RFT1Q96AA3 AP002414.4-201ENST00000589764 1148 ntBASIC14.74□□□□□ -0.05
RFT1Q96AA3 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC14.74□□□□□ -0.05
RFT1Q96AA3 Z69720.1-201ENST00000601483 472 ntBASIC14.74□□□□□ -0.05
RFT1Q96AA3 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC14.74□□□□□ -0.05
RFT1Q96AA3 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RFT1Q96AA3 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RFT1Q96AA3 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.74□□□□□ -0.05
RFT1Q96AA3 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RFT1Q96AA3 AC022532.1-201ENST00000624563 1728 ntBASIC14.74□□□□□ -0.05
RFT1Q96AA3 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RFT1Q96AA3 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RFT1Q96AA3 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RFT1Q96AA3 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RFT1Q96AA3 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RFT1Q96AA3 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.74□□□□□ -0.05
RFT1Q96AA3 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.74□□□□□ -0.05
RFT1Q96AA3 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RFT1Q96AA3 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RFT1Q96AA3 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
RFT1Q96AA3 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.74□□□□□ -0.05
RFT1Q96AA3 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RFT1Q96AA3 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
RFT1Q96AA3 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RFT1Q96AA3 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RFT1Q96AA3 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
RFT1Q96AA3 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
RFT1Q96AA3 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.73□□□□□ -0.05
RFT1Q96AA3 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC14.73□□□□□ -0.05
RFT1Q96AA3 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.73□□□□□ -0.05
RFT1Q96AA3 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RFT1Q96AA3 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RFT1Q96AA3 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RFT1Q96AA3 FRMD8P1-201ENST00000440433 1524 ntBASIC14.73□□□□□ -0.05
RFT1Q96AA3 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC14.73□□□□□ -0.05
RFT1Q96AA3 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC14.73□□□□□ -0.05
RFT1Q96AA3 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC14.73□□□□□ -0.05
RFT1Q96AA3 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.73□□□□□ -0.05
RFT1Q96AA3 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RFT1Q96AA3 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RFT1Q96AA3 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.73□□□□□ -0.05
RFT1Q96AA3 PPIH-202ENST00000372549 327 ntTSL 3 BASIC14.73□□□□□ -0.05
RFT1Q96AA3 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
RFT1Q96AA3 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RFT1Q96AA3 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC14.73□□□□□ -0.05
RFT1Q96AA3 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RFT1Q96AA3 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC14.73□□□□□ -0.05
RFT1Q96AA3 DANCR-204ENST00000444958 709 ntTSL 3 BASIC14.73□□□□□ -0.05
RFT1Q96AA3 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC14.73□□□□□ -0.05
RFT1Q96AA3 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC14.73□□□□□ -0.05
RFT1Q96AA3 TPSP2-201ENST00000561760 610 ntBASIC14.73□□□□□ -0.05
RFT1Q96AA3 AD001527.2-201ENST00000622994 785 ntBASIC14.73□□□□□ -0.05
RFT1Q96AA3 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
RFT1Q96AA3 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.73□□□□□ -0.05
RFT1Q96AA3 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC14.73□□□□□ -0.05
RFT1Q96AA3 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC14.73□□□□□ -0.05
RFT1Q96AA3 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RFT1Q96AA3 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
RFT1Q96AA3 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RFT1Q96AA3 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
RFT1Q96AA3 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.73□□□□□ -0.05
RFT1Q96AA3 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.73□□□□□ -0.05
RFT1Q96AA3 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RFT1Q96AA3 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
RFT1Q96AA3 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC14.73□□□□□ -0.05
RFT1Q96AA3 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC14.73□□□□□ -0.05
RFT1Q96AA3 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
RFT1Q96AA3 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFT1Q96AA3 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.72□□□□□ -0.05
RFT1Q96AA3 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFT1Q96AA3 NSUN5P1-202ENST00000421140 1535 ntBASIC14.72□□□□□ -0.05
RFT1Q96AA3 NSUN5P2-203ENST00000457352 1529 ntBASIC14.72□□□□□ -0.05
RFT1Q96AA3 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFT1Q96AA3 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFT1Q96AA3 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RFT1Q96AA3 AC073347.1-201ENST00000421633 2643 ntBASIC14.72□□□□□ -0.05
RFT1Q96AA3 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms