Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ERCC4Q92889 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ERCC4Q92889 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.84■□□□□ 0.61
ERCC4Q92889 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
ERCC4Q92889 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
ERCC4Q92889 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
ERCC4Q92889 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.61
ERCC4Q92889 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
ERCC4Q92889 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ERCC4Q92889 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC18.83■□□□□ 0.61
ERCC4Q92889 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.61
ERCC4Q92889 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC18.83■□□□□ 0.61
ERCC4Q92889 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.83■□□□□ 0.6
ERCC4Q92889 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.83■□□□□ 0.6
ERCC4Q92889 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
ERCC4Q92889 UPK3BP1-201ENST00000428678 509 ntBASIC18.83■□□□□ 0.6
ERCC4Q92889 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.83■□□□□ 0.6
ERCC4Q92889 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ERCC4Q92889 FGFR3P6-201ENST00000457012 610 ntBASIC18.83■□□□□ 0.6
ERCC4Q92889 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ERCC4Q92889 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.83■□□□□ 0.6
ERCC4Q92889 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ERCC4Q92889 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.83■□□□□ 0.6
ERCC4Q92889 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.83■□□□□ 0.6
ERCC4Q92889 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ERCC4Q92889 MTDHP4-201ENST00000600287 670 ntBASIC18.83■□□□□ 0.6
ERCC4Q92889 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.83■□□□□ 0.6
ERCC4Q92889 REXO1L3P-201ENST00000622202 1288 ntBASIC18.83■□□□□ 0.6
ERCC4Q92889 AL139288.1-201ENST00000623748 933 ntBASIC18.83■□□□□ 0.6
ERCC4Q92889 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
ERCC4Q92889 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC18.83■□□□□ 0.6
ERCC4Q92889 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.83■□□□□ 0.6
ERCC4Q92889 AC006504.4-201ENST00000592118 1568 ntBASIC18.83■□□□□ 0.6
ERCC4Q92889 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.6
ERCC4Q92889 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ERCC4Q92889 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC18.83■□□□□ 0.6
ERCC4Q92889 DBET-201ENST00000630918 3363 ntBASIC18.83■□□□□ 0.6
ERCC4Q92889 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ERCC4Q92889 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
ERCC4Q92889 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ERCC4Q92889 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC18.83■□□□□ 0.6
ERCC4Q92889 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC18.83■□□□□ 0.6
ERCC4Q92889 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
ERCC4Q92889 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
ERCC4Q92889 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
ERCC4Q92889 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ERCC4Q92889 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
ERCC4Q92889 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ERCC4Q92889 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ERCC4Q92889 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
ERCC4Q92889 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ERCC4Q92889 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ERCC4Q92889 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC18.82■□□□□ 0.6
ERCC4Q92889 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
ERCC4Q92889 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
ERCC4Q92889 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ERCC4Q92889 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ERCC4Q92889 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC18.82■□□□□ 0.6
ERCC4Q92889 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC18.82■□□□□ 0.6
ERCC4Q92889 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ERCC4Q92889 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.82■□□□□ 0.6
ERCC4Q92889 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ERCC4Q92889 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
ERCC4Q92889 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.82■□□□□ 0.6
ERCC4Q92889 SLC25A6P2-201ENST00000497974 877 ntBASIC18.82■□□□□ 0.6
ERCC4Q92889 KRT18P31-201ENST00000506277 1292 ntBASIC18.82■□□□□ 0.6
ERCC4Q92889 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.82■□□□□ 0.6
ERCC4Q92889 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
ERCC4Q92889 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.82■□□□□ 0.6
ERCC4Q92889 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.82■□□□□ 0.6
ERCC4Q92889 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
ERCC4Q92889 MIR4492-201ENST00000581627 80 ntBASIC18.82■□□□□ 0.6
ERCC4Q92889 AL355877.3-201ENST00000622820 899 ntBASIC18.82■□□□□ 0.6
ERCC4Q92889 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
ERCC4Q92889 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.82■□□□□ 0.6
ERCC4Q92889 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ERCC4Q92889 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ERCC4Q92889 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.82■□□□□ 0.6
ERCC4Q92889 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ERCC4Q92889 STK24-203ENST00000397517 4578 ntTSL 2 BASIC18.82■□□□□ 0.6
ERCC4Q92889 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC18.82■□□□□ 0.6
ERCC4Q92889 SLC22A20-204ENST00000530038 1673 ntBASIC18.82■□□□□ 0.6
ERCC4Q92889 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
ERCC4Q92889 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ERCC4Q92889 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ERCC4Q92889 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ERCC4Q92889 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
ERCC4Q92889 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ERCC4Q92889 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ERCC4Q92889 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ERCC4Q92889 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ERCC4Q92889 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC18.81■□□□□ 0.6
ERCC4Q92889 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ERCC4Q92889 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC18.81■□□□□ 0.6
ERCC4Q92889 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
ERCC4Q92889 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC18.81■□□□□ 0.6
ERCC4Q92889 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.81■□□□□ 0.6
ERCC4Q92889 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC18.81■□□□□ 0.6
ERCC4Q92889 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ERCC4Q92889 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms