Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RPGRQ92834 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RPGRQ92834 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RPGRQ92834 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RPGRQ92834 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
RPGRQ92834 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
RPGRQ92834 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RPGRQ92834 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RPGRQ92834 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC20.24■□□□□ 0.83
RPGRQ92834 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
RPGRQ92834 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RPGRQ92834 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RPGRQ92834 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC20.24■□□□□ 0.83
RPGRQ92834 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC20.24■□□□□ 0.83
RPGRQ92834 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RPGRQ92834 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RPGRQ92834 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC20.24■□□□□ 0.83
RPGRQ92834 MIR1909-201ENST00000411312 80 ntBASIC20.24■□□□□ 0.83
RPGRQ92834 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC20.24■□□□□ 0.83
RPGRQ92834 AC112492.5-201ENST00000421897 457 ntBASIC20.24■□□□□ 0.83
RPGRQ92834 MEP1AP4-201ENST00000423244 1087 ntBASIC20.24■□□□□ 0.83
RPGRQ92834 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RPGRQ92834 MYCLP2-201ENST00000449268 967 ntBASIC20.24■□□□□ 0.83
RPGRQ92834 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RPGRQ92834 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC20.24■□□□□ 0.83
RPGRQ92834 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC20.24■□□□□ 0.83
RPGRQ92834 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RPGRQ92834 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC20.24■□□□□ 0.83
RPGRQ92834 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC20.24■□□□□ 0.83
RPGRQ92834 RAB43P1-201ENST00000561790 589 ntBASIC20.24■□□□□ 0.83
RPGRQ92834 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC20.24■□□□□ 0.83
RPGRQ92834 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC20.24■□□□□ 0.83
RPGRQ92834 5S_rRNA.22-201ENST00000614916 106 ntBASIC20.24■□□□□ 0.83
RPGRQ92834 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
RPGRQ92834 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
RPGRQ92834 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RPGRQ92834 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC20.24■□□□□ 0.83
RPGRQ92834 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RPGRQ92834 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RPGRQ92834 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC20.24■□□□□ 0.83
RPGRQ92834 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RPGRQ92834 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RPGRQ92834 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RPGRQ92834 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RPGRQ92834 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC20.24■□□□□ 0.83
RPGRQ92834 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RPGRQ92834 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RPGRQ92834 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
RPGRQ92834 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
RPGRQ92834 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC20.23■□□□□ 0.83
RPGRQ92834 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
RPGRQ92834 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
RPGRQ92834 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
RPGRQ92834 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
RPGRQ92834 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RPGRQ92834 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RPGRQ92834 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RPGRQ92834 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RPGRQ92834 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RPGRQ92834 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC20.23■□□□□ 0.83
RPGRQ92834 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
RPGRQ92834 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC20.23■□□□□ 0.83
RPGRQ92834 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RPGRQ92834 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC20.23■□□□□ 0.83
RPGRQ92834 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC20.23■□□□□ 0.83
RPGRQ92834 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC20.23■□□□□ 0.83
RPGRQ92834 AC023310.3-201ENST00000557027 670 ntBASIC20.23■□□□□ 0.83
RPGRQ92834 AC100756.1-201ENST00000562736 682 ntBASIC20.23■□□□□ 0.83
RPGRQ92834 AC138749.3-201ENST00000567691 622 ntBASIC20.23■□□□□ 0.83
RPGRQ92834 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC20.23■□□□□ 0.83
RPGRQ92834 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC20.23■□□□□ 0.83
RPGRQ92834 AC116165.1-201ENST00000611806 668 ntBASIC20.23■□□□□ 0.83
RPGRQ92834 MIR6805-201ENST00000615055 62 ntBASIC20.23■□□□□ 0.83
RPGRQ92834 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC20.23■□□□□ 0.83
RPGRQ92834 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RPGRQ92834 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
RPGRQ92834 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
RPGRQ92834 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC20.23■□□□□ 0.83
RPGRQ92834 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC20.23■□□□□ 0.83
RPGRQ92834 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC20.23■□□□□ 0.83
RPGRQ92834 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RPGRQ92834 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
RPGRQ92834 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RPGRQ92834 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC20.22■□□□□ 0.83
RPGRQ92834 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RPGRQ92834 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
RPGRQ92834 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC20.22■□□□□ 0.83
RPGRQ92834 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
RPGRQ92834 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC20.22■□□□□ 0.83
RPGRQ92834 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
RPGRQ92834 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC20.22■□□□□ 0.83
RPGRQ92834 GPAA1P2-202ENST00000606848 1787 ntBASIC20.22■□□□□ 0.83
RPGRQ92834 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC20.22■□□□□ 0.83
RPGRQ92834 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RPGRQ92834 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
RPGRQ92834 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC20.22■□□□□ 0.83
RPGRQ92834 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
RPGRQ92834 TTTY23B-201ENST00000442790 549 ntBASIC20.22■□□□□ 0.83
RPGRQ92834 RN7SL837P-201ENST00000463010 287 ntBASIC20.22■□□□□ 0.83
RPGRQ92834 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms