Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.61■□□□□ 0.41
DDX1Q92499 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
DDX1Q92499 REXO1L8P-201ENST00000604378 1897 ntBASIC17.61■□□□□ 0.41
DDX1Q92499 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
DDX1Q92499 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
DDX1Q92499 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
DDX1Q92499 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
DDX1Q92499 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC17.61■□□□□ 0.41
DDX1Q92499 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
DDX1Q92499 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
DDX1Q92499 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
DDX1Q92499 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
DDX1Q92499 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
DDX1Q92499 AC109635.5-201ENST00000533593 962 ntBASIC17.61■□□□□ 0.41
DDX1Q92499 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.61■□□□□ 0.41
DDX1Q92499 C20orf181-201ENST00000623918 480 ntBASIC17.61■□□□□ 0.41
DDX1Q92499 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
DDX1Q92499 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.61■□□□□ 0.41
DDX1Q92499 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC17.61■□□□□ 0.41
DDX1Q92499 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
DDX1Q92499 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.61■□□□□ 0.41
DDX1Q92499 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
DDX1Q92499 AC025580.3-201ENST00000617932 1424 ntBASIC17.61■□□□□ 0.41
DDX1Q92499 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
DDX1Q92499 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
DDX1Q92499 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
DDX1Q92499 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.61■□□□□ 0.41
DDX1Q92499 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.61■□□□□ 0.41
DDX1Q92499 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
DDX1Q92499 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
DDX1Q92499 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.6■□□□□ 0.41
DDX1Q92499 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
DDX1Q92499 AC006449.6-201ENST00000612330 2296 ntBASIC17.6■□□□□ 0.41
DDX1Q92499 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.6■□□□□ 0.41
DDX1Q92499 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.6■□□□□ 0.41
DDX1Q92499 LINC02199-201ENST00000506655 2702 ntBASIC17.6■□□□□ 0.41
DDX1Q92499 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
DDX1Q92499 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
DDX1Q92499 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
DDX1Q92499 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
DDX1Q92499 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
DDX1Q92499 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.6■□□□□ 0.41
DDX1Q92499 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.6■□□□□ 0.41
DDX1Q92499 MKNK2P1-201ENST00000437526 628 ntBASIC17.6■□□□□ 0.41
DDX1Q92499 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.6■□□□□ 0.41
DDX1Q92499 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
DDX1Q92499 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.6■□□□□ 0.41
DDX1Q92499 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.6■□□□□ 0.41
DDX1Q92499 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
DDX1Q92499 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.6■□□□□ 0.41
DDX1Q92499 KRT19P2-202ENST00000557173 1012 ntBASIC17.6■□□□□ 0.41
DDX1Q92499 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.6■□□□□ 0.41
DDX1Q92499 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.6■□□□□ 0.41
DDX1Q92499 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
DDX1Q92499 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.6■□□□□ 0.41
DDX1Q92499 AL009183.1-201ENST00000603760 355 ntBASIC17.6■□□□□ 0.41
DDX1Q92499 AC007064.4-201ENST00000637740 555 ntBASIC17.6■□□□□ 0.41
DDX1Q92499 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
DDX1Q92499 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
DDX1Q92499 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.6■□□□□ 0.41
DDX1Q92499 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.6■□□□□ 0.41
DDX1Q92499 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
DDX1Q92499 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.6■□□□□ 0.41
DDX1Q92499 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
DDX1Q92499 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
DDX1Q92499 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
DDX1Q92499 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
DDX1Q92499 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.6■□□□□ 0.41
DDX1Q92499 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
DDX1Q92499 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.59■□□□□ 0.41
DDX1Q92499 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
DDX1Q92499 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
DDX1Q92499 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
DDX1Q92499 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.59■□□□□ 0.41
DDX1Q92499 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
DDX1Q92499 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
DDX1Q92499 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.59■□□□□ 0.41
DDX1Q92499 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
DDX1Q92499 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.59■□□□□ 0.41
DDX1Q92499 AC140658.5-201ENST00000438532 169 ntBASIC17.59■□□□□ 0.41
DDX1Q92499 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
DDX1Q92499 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.59■□□□□ 0.41
DDX1Q92499 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC17.59■□□□□ 0.41
DDX1Q92499 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.59■□□□□ 0.41
DDX1Q92499 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.59■□□□□ 0.41
DDX1Q92499 AC190387.1-201ENST00000551683 408 ntBASIC17.59■□□□□ 0.41
DDX1Q92499 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.59■□□□□ 0.41
DDX1Q92499 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
DDX1Q92499 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
DDX1Q92499 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
DDX1Q92499 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
DDX1Q92499 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
DDX1Q92499 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
DDX1Q92499 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.58■□□□□ 0.41
DDX1Q92499 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.58■□□□□ 0.41
DDX1Q92499 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.41
DDX1Q92499 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
DDX1Q92499 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.58■□□□□ 0.41
DDX1Q92499 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
DDX1Q92499 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms