Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
CKAP2Q8WWK9 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CKAP2Q8WWK9 TMBIM7P-203ENST00000641617 1718 ntBASIC16.5■□□□□ 0.23
CKAP2Q8WWK9 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
CKAP2Q8WWK9 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CKAP2Q8WWK9 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CKAP2Q8WWK9 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.5■□□□□ 0.23
CKAP2Q8WWK9 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CKAP2Q8WWK9 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.5■□□□□ 0.23
CKAP2Q8WWK9 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CKAP2Q8WWK9 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.5■□□□□ 0.23
CKAP2Q8WWK9 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CKAP2Q8WWK9 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
CKAP2Q8WWK9 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CKAP2Q8WWK9 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CKAP2Q8WWK9 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CKAP2Q8WWK9 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CKAP2Q8WWK9 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
CKAP2Q8WWK9 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
CKAP2Q8WWK9 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.49■□□□□ 0.23
CKAP2Q8WWK9 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CKAP2Q8WWK9 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CKAP2Q8WWK9 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
CKAP2Q8WWK9 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CKAP2Q8WWK9 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.49■□□□□ 0.23
CKAP2Q8WWK9 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC16.49■□□□□ 0.23
CKAP2Q8WWK9 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CKAP2Q8WWK9 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
CKAP2Q8WWK9 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CKAP2Q8WWK9 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CKAP2Q8WWK9 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CKAP2Q8WWK9 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CKAP2Q8WWK9 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.49■□□□□ 0.23
CKAP2Q8WWK9 LINC00982-205ENST00000420957 435 ntBASIC16.49■□□□□ 0.23
CKAP2Q8WWK9 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC16.49■□□□□ 0.23
CKAP2Q8WWK9 YBX1P2-201ENST00000489612 999 ntBASIC16.49■□□□□ 0.23
CKAP2Q8WWK9 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CKAP2Q8WWK9 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC16.49■□□□□ 0.23
CKAP2Q8WWK9 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.49■□□□□ 0.23
CKAP2Q8WWK9 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CKAP2Q8WWK9 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CKAP2Q8WWK9 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.49■□□□□ 0.23
CKAP2Q8WWK9 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CKAP2Q8WWK9 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CKAP2Q8WWK9 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CKAP2Q8WWK9 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CKAP2Q8WWK9 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CKAP2Q8WWK9 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CKAP2Q8WWK9 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CKAP2Q8WWK9 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CKAP2Q8WWK9 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CKAP2Q8WWK9 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC16.49■□□□□ 0.23
CKAP2Q8WWK9 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CKAP2Q8WWK9 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CKAP2Q8WWK9 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.49■□□□□ 0.23
CKAP2Q8WWK9 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CKAP2Q8WWK9 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.49■□□□□ 0.23
CKAP2Q8WWK9 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.49■□□□□ 0.23
CKAP2Q8WWK9 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CKAP2Q8WWK9 AC092919.2-201ENST00000623631 1645 ntBASIC16.48■□□□□ 0.23
CKAP2Q8WWK9 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CKAP2Q8WWK9 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
CKAP2Q8WWK9 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CKAP2Q8WWK9 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CKAP2Q8WWK9 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CKAP2Q8WWK9 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CKAP2Q8WWK9 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
CKAP2Q8WWK9 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.48■□□□□ 0.23
CKAP2Q8WWK9 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CKAP2Q8WWK9 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CKAP2Q8WWK9 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CKAP2Q8WWK9 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CKAP2Q8WWK9 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CKAP2Q8WWK9 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CKAP2Q8WWK9 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CKAP2Q8WWK9 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CKAP2Q8WWK9 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CKAP2Q8WWK9 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CKAP2Q8WWK9 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CKAP2Q8WWK9 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CKAP2Q8WWK9 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
CKAP2Q8WWK9 AC112907.2-201ENST00000448639 330 ntBASIC16.48■□□□□ 0.23
CKAP2Q8WWK9 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CKAP2Q8WWK9 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.48■□□□□ 0.23
CKAP2Q8WWK9 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.48■□□□□ 0.23
CKAP2Q8WWK9 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC16.48■□□□□ 0.23
CKAP2Q8WWK9 AC139887.4-201ENST00000607877 719 ntBASIC16.48■□□□□ 0.23
CKAP2Q8WWK9 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.48■□□□□ 0.23
CKAP2Q8WWK9 AC097493.4-201ENST00000641197 219 ntBASIC16.48■□□□□ 0.23
CKAP2Q8WWK9 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.48■□□□□ 0.23
CKAP2Q8WWK9 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.48■□□□□ 0.23
CKAP2Q8WWK9 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CKAP2Q8WWK9 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CKAP2Q8WWK9 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CKAP2Q8WWK9 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CKAP2Q8WWK9 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CKAP2Q8WWK9 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.48■□□□□ 0.23
CKAP2Q8WWK9 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.48■□□□□ 0.23
CKAP2Q8WWK9 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CKAP2Q8WWK9 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms