Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.82■□□□□ 0.28
PTCD2Q8WV60 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
PTCD2Q8WV60 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
PTCD2Q8WV60 KRT19P2-202ENST00000557173 1012 ntBASIC16.82■□□□□ 0.28
PTCD2Q8WV60 AC096734.2-201ENST00000562054 433 ntBASIC16.82■□□□□ 0.28
PTCD2Q8WV60 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTCD2Q8WV60 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.82■□□□□ 0.28
PTCD2Q8WV60 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
PTCD2Q8WV60 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTCD2Q8WV60 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.82■□□□□ 0.28
PTCD2Q8WV60 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTCD2Q8WV60 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTCD2Q8WV60 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTCD2Q8WV60 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTCD2Q8WV60 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTCD2Q8WV60 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PTCD2Q8WV60 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
PTCD2Q8WV60 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTCD2Q8WV60 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTCD2Q8WV60 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTCD2Q8WV60 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.81■□□□□ 0.28
PTCD2Q8WV60 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.81■□□□□ 0.28
PTCD2Q8WV60 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.81■□□□□ 0.28
PTCD2Q8WV60 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
PTCD2Q8WV60 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PTCD2Q8WV60 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTCD2Q8WV60 AC025580.3-201ENST00000617932 1424 ntBASIC16.81■□□□□ 0.28
PTCD2Q8WV60 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTCD2Q8WV60 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTCD2Q8WV60 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
PTCD2Q8WV60 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.81■□□□□ 0.28
PTCD2Q8WV60 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.81■□□□□ 0.28
PTCD2Q8WV60 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.81■□□□□ 0.28
PTCD2Q8WV60 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
PTCD2Q8WV60 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.81■□□□□ 0.28
PTCD2Q8WV60 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.81■□□□□ 0.28
PTCD2Q8WV60 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTCD2Q8WV60 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PTCD2Q8WV60 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PTCD2Q8WV60 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
PTCD2Q8WV60 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.81■□□□□ 0.28
PTCD2Q8WV60 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.81■□□□□ 0.28
PTCD2Q8WV60 FAM185BP-201ENST00000443595 716 ntBASIC16.81■□□□□ 0.28
PTCD2Q8WV60 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.81■□□□□ 0.28
PTCD2Q8WV60 CXCL1P1-201ENST00000502804 216 ntBASIC16.81■□□□□ 0.28
PTCD2Q8WV60 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.81■□□□□ 0.28
PTCD2Q8WV60 AC004672.2-201ENST00000537181 574 ntTSL 2 BASIC16.81■□□□□ 0.28
PTCD2Q8WV60 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.81■□□□□ 0.28
PTCD2Q8WV60 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.81■□□□□ 0.28
PTCD2Q8WV60 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC16.81■□□□□ 0.28
PTCD2Q8WV60 AL391262.2-201ENST00000622466 494 ntBASIC16.81■□□□□ 0.28
PTCD2Q8WV60 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.81■□□□□ 0.28
PTCD2Q8WV60 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTCD2Q8WV60 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTCD2Q8WV60 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTCD2Q8WV60 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
PTCD2Q8WV60 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTCD2Q8WV60 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTCD2Q8WV60 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTCD2Q8WV60 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTCD2Q8WV60 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTCD2Q8WV60 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PTCD2Q8WV60 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.8■□□□□ 0.28
PTCD2Q8WV60 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.8■□□□□ 0.28
PTCD2Q8WV60 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PTCD2Q8WV60 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTCD2Q8WV60 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTCD2Q8WV60 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTCD2Q8WV60 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PTCD2Q8WV60 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.8■□□□□ 0.28
PTCD2Q8WV60 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.8■□□□□ 0.28
PTCD2Q8WV60 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
PTCD2Q8WV60 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.8■□□□□ 0.28
PTCD2Q8WV60 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTCD2Q8WV60 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PTCD2Q8WV60 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.8■□□□□ 0.28
PTCD2Q8WV60 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PTCD2Q8WV60 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PTCD2Q8WV60 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTCD2Q8WV60 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTCD2Q8WV60 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.8■□□□□ 0.28
PTCD2Q8WV60 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PTCD2Q8WV60 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.8■□□□□ 0.28
PTCD2Q8WV60 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.8■□□□□ 0.28
PTCD2Q8WV60 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PTCD2Q8WV60 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.8■□□□□ 0.28
PTCD2Q8WV60 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTCD2Q8WV60 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTCD2Q8WV60 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PTCD2Q8WV60 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTCD2Q8WV60 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTCD2Q8WV60 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTCD2Q8WV60 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
PTCD2Q8WV60 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
PTCD2Q8WV60 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.8■□□□□ 0.28
PTCD2Q8WV60 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
PTCD2Q8WV60 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
PTCD2Q8WV60 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
PTCD2Q8WV60 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.8■□□□□ 0.28
PTCD2Q8WV60 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms