Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.68■□□□□ 0.42
LMO3Q8TAP4 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
LMO3Q8TAP4 AL138918.1-201ENST00000568306 659 ntBASIC17.68■□□□□ 0.42
LMO3Q8TAP4 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LMO3Q8TAP4 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.68■□□□□ 0.42
LMO3Q8TAP4 AC091812.2-201ENST00000619081 385 ntBASIC17.68■□□□□ 0.42
LMO3Q8TAP4 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.68■□□□□ 0.42
LMO3Q8TAP4 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
LMO3Q8TAP4 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LMO3Q8TAP4 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
LMO3Q8TAP4 AC022188.1-201ENST00000620960 1664 ntBASIC17.67■□□□□ 0.42
LMO3Q8TAP4 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.67■□□□□ 0.42
LMO3Q8TAP4 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LMO3Q8TAP4 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LMO3Q8TAP4 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
LMO3Q8TAP4 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
LMO3Q8TAP4 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
LMO3Q8TAP4 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LMO3Q8TAP4 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.67■□□□□ 0.42
LMO3Q8TAP4 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.67■□□□□ 0.42
LMO3Q8TAP4 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LMO3Q8TAP4 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
LMO3Q8TAP4 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LMO3Q8TAP4 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LMO3Q8TAP4 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LMO3Q8TAP4 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LMO3Q8TAP4 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LMO3Q8TAP4 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LMO3Q8TAP4 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.67■□□□□ 0.42
LMO3Q8TAP4 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.67■□□□□ 0.42
LMO3Q8TAP4 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
LMO3Q8TAP4 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.67■□□□□ 0.42
LMO3Q8TAP4 AC112191.1-201ENST00000523689 701 ntBASIC17.67■□□□□ 0.42
LMO3Q8TAP4 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.67■□□□□ 0.42
LMO3Q8TAP4 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.67■□□□□ 0.42
LMO3Q8TAP4 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LMO3Q8TAP4 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.67■□□□□ 0.42
LMO3Q8TAP4 AC040169.1-201ENST00000565382 521 ntBASIC17.67■□□□□ 0.42
LMO3Q8TAP4 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.67■□□□□ 0.42
LMO3Q8TAP4 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.67■□□□□ 0.42
LMO3Q8TAP4 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.67■□□□□ 0.42
LMO3Q8TAP4 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LMO3Q8TAP4 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.67■□□□□ 0.42
LMO3Q8TAP4 AC007950.2-201ENST00000615045 2347 ntBASIC17.67■□□□□ 0.42
LMO3Q8TAP4 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LMO3Q8TAP4 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LMO3Q8TAP4 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
LMO3Q8TAP4 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LMO3Q8TAP4 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LMO3Q8TAP4 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LMO3Q8TAP4 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.67■□□□□ 0.42
LMO3Q8TAP4 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LMO3Q8TAP4 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
LMO3Q8TAP4 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LMO3Q8TAP4 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
LMO3Q8TAP4 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.66■□□□□ 0.42
LMO3Q8TAP4 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.66■□□□□ 0.42
LMO3Q8TAP4 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.66■□□□□ 0.42
LMO3Q8TAP4 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.66■□□□□ 0.42
LMO3Q8TAP4 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LMO3Q8TAP4 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.66■□□□□ 0.42
LMO3Q8TAP4 AC010491.1-201ENST00000563101 2797 ntBASIC17.66■□□□□ 0.42
LMO3Q8TAP4 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.66■□□□□ 0.42
LMO3Q8TAP4 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.66■□□□□ 0.42
LMO3Q8TAP4 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LMO3Q8TAP4 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LMO3Q8TAP4 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LMO3Q8TAP4 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
LMO3Q8TAP4 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LMO3Q8TAP4 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.66■□□□□ 0.42
LMO3Q8TAP4 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
LMO3Q8TAP4 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.66■□□□□ 0.42
LMO3Q8TAP4 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LMO3Q8TAP4 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.66■□□□□ 0.42
LMO3Q8TAP4 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
LMO3Q8TAP4 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LMO3Q8TAP4 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LMO3Q8TAP4 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
LMO3Q8TAP4 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LMO3Q8TAP4 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.66■□□□□ 0.42
LMO3Q8TAP4 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
LMO3Q8TAP4 FOXO1B-201ENST00000504678 1527 ntBASIC17.66■□□□□ 0.42
LMO3Q8TAP4 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LMO3Q8TAP4 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.66■□□□□ 0.42
LMO3Q8TAP4 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LMO3Q8TAP4 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.66■□□□□ 0.42
LMO3Q8TAP4 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LMO3Q8TAP4 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.65■□□□□ 0.42
LMO3Q8TAP4 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
LMO3Q8TAP4 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LMO3Q8TAP4 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LMO3Q8TAP4 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LMO3Q8TAP4 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.65■□□□□ 0.42
LMO3Q8TAP4 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LMO3Q8TAP4 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LMO3Q8TAP4 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.65■□□□□ 0.42
LMO3Q8TAP4 AL355306.1-201ENST00000415580 579 ntBASIC17.65■□□□□ 0.42
LMO3Q8TAP4 AC004832.2-201ENST00000426397 482 ntBASIC17.65■□□□□ 0.42
LMO3Q8TAP4 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.65■□□□□ 0.42
LMO3Q8TAP4 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms