Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 GPER1-207ENST00000619052 571 ntTSL 2 BASIC19.18■□□□□ 0.66
NEDD1Q8NHV4 AC011676.5-201ENST00000624864 2660 ntBASIC19.18■□□□□ 0.66
NEDD1Q8NHV4 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NEDD1Q8NHV4 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
NEDD1Q8NHV4 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NEDD1Q8NHV4 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC19.18■□□□□ 0.66
NEDD1Q8NHV4 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC19.18■□□□□ 0.66
NEDD1Q8NHV4 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC19.18■□□□□ 0.66
NEDD1Q8NHV4 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
NEDD1Q8NHV4 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NEDD1Q8NHV4 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
NEDD1Q8NHV4 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC19.18■□□□□ 0.66
NEDD1Q8NHV4 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC19.18■□□□□ 0.66
NEDD1Q8NHV4 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NEDD1Q8NHV4 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
NEDD1Q8NHV4 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NEDD1Q8NHV4 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NEDD1Q8NHV4 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
NEDD1Q8NHV4 GRAMD4P3-201ENST00000621665 1669 ntBASIC19.17■□□□□ 0.66
NEDD1Q8NHV4 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
NEDD1Q8NHV4 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC19.17■□□□□ 0.66
NEDD1Q8NHV4 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
NEDD1Q8NHV4 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC19.17■□□□□ 0.66
NEDD1Q8NHV4 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NEDD1Q8NHV4 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
NEDD1Q8NHV4 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
NEDD1Q8NHV4 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
NEDD1Q8NHV4 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
NEDD1Q8NHV4 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NEDD1Q8NHV4 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NEDD1Q8NHV4 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC19.17■□□□□ 0.66
NEDD1Q8NHV4 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC19.17■□□□□ 0.66
NEDD1Q8NHV4 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NEDD1Q8NHV4 RNA5SP421-201ENST00000516864 134 ntBASIC19.17■□□□□ 0.66
NEDD1Q8NHV4 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC19.17■□□□□ 0.66
NEDD1Q8NHV4 RN7SL828P-201ENST00000607615 303 ntBASIC19.17■□□□□ 0.66
NEDD1Q8NHV4 AL133215.2-201ENST00000609242 977 ntBASIC19.17■□□□□ 0.66
NEDD1Q8NHV4 AC073592.8-201ENST00000624126 511 ntBASIC19.17■□□□□ 0.66
NEDD1Q8NHV4 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NEDD1Q8NHV4 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NEDD1Q8NHV4 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC19.17■□□□□ 0.66
NEDD1Q8NHV4 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NEDD1Q8NHV4 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
NEDD1Q8NHV4 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
NEDD1Q8NHV4 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NEDD1Q8NHV4 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
NEDD1Q8NHV4 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NEDD1Q8NHV4 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NEDD1Q8NHV4 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
NEDD1Q8NHV4 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NEDD1Q8NHV4 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NEDD1Q8NHV4 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC19.17■□□□□ 0.66
NEDD1Q8NHV4 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
NEDD1Q8NHV4 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NEDD1Q8NHV4 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC19.17■□□□□ 0.66
NEDD1Q8NHV4 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
NEDD1Q8NHV4 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
NEDD1Q8NHV4 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC19.17■□□□□ 0.66
NEDD1Q8NHV4 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
NEDD1Q8NHV4 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
NEDD1Q8NHV4 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NEDD1Q8NHV4 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
NEDD1Q8NHV4 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NEDD1Q8NHV4 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NEDD1Q8NHV4 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NEDD1Q8NHV4 U82695.1-201ENST00000635752 1889 ntBASIC19.16■□□□□ 0.66
NEDD1Q8NHV4 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
NEDD1Q8NHV4 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NEDD1Q8NHV4 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NEDD1Q8NHV4 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NEDD1Q8NHV4 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
NEDD1Q8NHV4 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NEDD1Q8NHV4 BASP1P1-201ENST00000430708 665 ntBASIC19.16■□□□□ 0.66
NEDD1Q8NHV4 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC19.16■□□□□ 0.66
NEDD1Q8NHV4 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
NEDD1Q8NHV4 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NEDD1Q8NHV4 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC19.16■□□□□ 0.66
NEDD1Q8NHV4 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC19.16■□□□□ 0.66
NEDD1Q8NHV4 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NEDD1Q8NHV4 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC19.16■□□□□ 0.66
NEDD1Q8NHV4 SPDYE12P-201ENST00000618416 771 ntBASIC19.16■□□□□ 0.66
NEDD1Q8NHV4 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
NEDD1Q8NHV4 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NEDD1Q8NHV4 OS9-205ENST00000413095 1660 ntTSL 2 BASIC19.16■□□□□ 0.66
NEDD1Q8NHV4 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NEDD1Q8NHV4 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NEDD1Q8NHV4 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NEDD1Q8NHV4 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC19.16■□□□□ 0.66
NEDD1Q8NHV4 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
NEDD1Q8NHV4 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC19.16■□□□□ 0.66
NEDD1Q8NHV4 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NEDD1Q8NHV4 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC19.16■□□□□ 0.66
NEDD1Q8NHV4 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
NEDD1Q8NHV4 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
NEDD1Q8NHV4 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NEDD1Q8NHV4 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NEDD1Q8NHV4 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC19.15■□□□□ 0.66
NEDD1Q8NHV4 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NEDD1Q8NHV4 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC19.15■□□□□ 0.66
NEDD1Q8NHV4 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms