Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
SPTSSBQ8NFR3 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC9.1□□□□□ -0.95
SPTSSBQ8NFR3 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC9.1□□□□□ -0.95
SPTSSBQ8NFR3 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
SPTSSBQ8NFR3 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC9.09□□□□□ -0.95
SPTSSBQ8NFR3 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
SPTSSBQ8NFR3 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
SPTSSBQ8NFR3 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SPTSSBQ8NFR3 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SPTSSBQ8NFR3 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
SPTSSBQ8NFR3 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
SPTSSBQ8NFR3 PTCD1-201ENST00000292478 5582 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SPTSSBQ8NFR3 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC9.09□□□□□ -0.95
SPTSSBQ8NFR3 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC9.09□□□□□ -0.95
SPTSSBQ8NFR3 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SPTSSBQ8NFR3 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
SPTSSBQ8NFR3 CD38-201ENST00000226279 5668 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SPTSSBQ8NFR3 FUK-202ENST00000378912 3925 ntTSL 2 BASIC9.09□□□□□ -0.95
SPTSSBQ8NFR3 DNMT1-202ENST00000359526 5206 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
SPTSSBQ8NFR3 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SPTSSBQ8NFR3 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SPTSSBQ8NFR3 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
SPTSSBQ8NFR3 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
SPTSSBQ8NFR3 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC9.09□□□□□ -0.95
SPTSSBQ8NFR3 ADAMTS10-211ENST00000597188 3749 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
SPTSSBQ8NFR3 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SPTSSBQ8NFR3 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SPTSSBQ8NFR3 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SPTSSBQ8NFR3 GRM4-202ENST00000374181 7275 ntTSL 5 BASIC9.09□□□□□ -0.95
SPTSSBQ8NFR3 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC9.09□□□□□ -0.95
SPTSSBQ8NFR3 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SPTSSBQ8NFR3 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC9.09□□□□□ -0.95
SPTSSBQ8NFR3 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SPTSSBQ8NFR3 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC9.09□□□□□ -0.95
SPTSSBQ8NFR3 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC9.09□□□□□ -0.95
SPTSSBQ8NFR3 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC9.09□□□□□ -0.95
SPTSSBQ8NFR3 OR2A1-AS1-204ENST00000470435 602 ntBASIC9.09□□□□□ -0.95
SPTSSBQ8NFR3 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
SPTSSBQ8NFR3 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC9.09□□□□□ -0.95
SPTSSBQ8NFR3 CYP2T3P-201ENST00000601990 817 ntBASIC9.09□□□□□ -0.95
SPTSSBQ8NFR3 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC9.09□□□□□ -0.95
SPTSSBQ8NFR3 AC116407.2-201ENST00000613639 860 ntBASIC9.09□□□□□ -0.95
SPTSSBQ8NFR3 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
SPTSSBQ8NFR3 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SPTSSBQ8NFR3 MYO1D-202ENST00000394649 5451 ntTSL 5 BASIC9.09□□□□□ -0.95
SPTSSBQ8NFR3 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC9.09□□□□□ -0.95
SPTSSBQ8NFR3 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC9.09□□□□□ -0.95
SPTSSBQ8NFR3 HECTD4-202ENST00000377560 15759 ntAPPRIS P5 TSL 5 BASIC9.09□□□□□ -0.95
SPTSSBQ8NFR3 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC9.09□□□□□ -0.95
SPTSSBQ8NFR3 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
SPTSSBQ8NFR3 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC9.09□□□□□ -0.95
SPTSSBQ8NFR3 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
SPTSSBQ8NFR3 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC9.09□□□□□ -0.95
SPTSSBQ8NFR3 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
SPTSSBQ8NFR3 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SPTSSBQ8NFR3 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SPTSSBQ8NFR3 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
SPTSSBQ8NFR3 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
SPTSSBQ8NFR3 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
SPTSSBQ8NFR3 ATP8A1-201ENST00000264449 8209 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SPTSSBQ8NFR3 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
SPTSSBQ8NFR3 RASAL2-201ENST00000367649 4378 ntAPPRIS P4 TSL 1 (best) BASIC9.09□□□□□ -0.95
SPTSSBQ8NFR3 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SPTSSBQ8NFR3 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SPTSSBQ8NFR3 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC9.09□□□□□ -0.95
SPTSSBQ8NFR3 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC9.09□□□□□ -0.95
SPTSSBQ8NFR3 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC9.09□□□□□ -0.96
SPTSSBQ8NFR3 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SPTSSBQ8NFR3 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC9.08□□□□□ -0.96
SPTSSBQ8NFR3 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC9.08□□□□□ -0.96
SPTSSBQ8NFR3 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SPTSSBQ8NFR3 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SPTSSBQ8NFR3 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
SPTSSBQ8NFR3 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC9.08□□□□□ -0.96
SPTSSBQ8NFR3 TMEM33-202ENST00000325094 6221 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SPTSSBQ8NFR3 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC9.08□□□□□ -0.96
SPTSSBQ8NFR3 GREB1L-202ENST00000424526 6052 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
SPTSSBQ8NFR3 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC9.08□□□□□ -0.96
SPTSSBQ8NFR3 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
SPTSSBQ8NFR3 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
SPTSSBQ8NFR3 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
SPTSSBQ8NFR3 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
SPTSSBQ8NFR3 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
SPTSSBQ8NFR3 GSTM3-201ENST00000256594 4046 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SPTSSBQ8NFR3 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
SPTSSBQ8NFR3 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC9.08□□□□□ -0.96
SPTSSBQ8NFR3 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SPTSSBQ8NFR3 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC9.08□□□□□ -0.96
SPTSSBQ8NFR3 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
SPTSSBQ8NFR3 GREB1-204ENST00000381486 8484 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
SPTSSBQ8NFR3 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
SPTSSBQ8NFR3 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC9.08□□□□□ -0.96
SPTSSBQ8NFR3 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SPTSSBQ8NFR3 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
SPTSSBQ8NFR3 AL355312.1-201ENST00000407115 2176 ntBASIC9.08□□□□□ -0.96
SPTSSBQ8NFR3 PEX5L-208ENST00000467460 9082 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
SPTSSBQ8NFR3 VWDE-206ENST00000614403 4701 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
SPTSSBQ8NFR3 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SPTSSBQ8NFR3 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SPTSSBQ8NFR3 COX20-201ENST00000366528 568 ntTSL 2 BASIC9.08□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms