Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC25.46■■□□□ 1.67
CFAP43Q8NDM7 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC25.46■■□□□ 1.67
CFAP43Q8NDM7 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC25.46■■□□□ 1.67
CFAP43Q8NDM7 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
CFAP43Q8NDM7 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC25.46■■□□□ 1.67
CFAP43Q8NDM7 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC25.46■■□□□ 1.67
CFAP43Q8NDM7 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC25.46■■□□□ 1.67
CFAP43Q8NDM7 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CFAP43Q8NDM7 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CFAP43Q8NDM7 TUBB1P2-201ENST00000422712 1306 ntBASIC25.46■■□□□ 1.67
CFAP43Q8NDM7 TUBB1P1-201ENST00000503144 1300 ntBASIC25.46■■□□□ 1.67
CFAP43Q8NDM7 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CFAP43Q8NDM7 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC25.46■■□□□ 1.67
CFAP43Q8NDM7 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC25.46■■□□□ 1.67
CFAP43Q8NDM7 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC25.46■■□□□ 1.67
CFAP43Q8NDM7 AC120498.9-201ENST00000339021 3867 ntBASIC25.46■■□□□ 1.67
CFAP43Q8NDM7 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CFAP43Q8NDM7 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
CFAP43Q8NDM7 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC25.45■■□□□ 1.67
CFAP43Q8NDM7 HAUS4P1-201ENST00000406739 1145 ntBASIC25.45■■□□□ 1.67
CFAP43Q8NDM7 HLA-DPB2-205ENST00000435074 1188 ntBASIC25.45■■□□□ 1.67
CFAP43Q8NDM7 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC25.45■■□□□ 1.67
CFAP43Q8NDM7 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC25.45■■□□□ 1.67
CFAP43Q8NDM7 NAA38-207ENST00000576861 556 ntTSL 3 BASIC25.45■■□□□ 1.67
CFAP43Q8NDM7 GPR182-203ENST00000622922 591 ntBASIC25.45■■□□□ 1.67
CFAP43Q8NDM7 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC25.45■■□□□ 1.67
CFAP43Q8NDM7 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC25.45■■□□□ 1.67
CFAP43Q8NDM7 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC25.45■■□□□ 1.67
CFAP43Q8NDM7 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
CFAP43Q8NDM7 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC25.45■■□□□ 1.67
CFAP43Q8NDM7 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC25.45■■□□□ 1.67
CFAP43Q8NDM7 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
CFAP43Q8NDM7 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.67
CFAP43Q8NDM7 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC25.45■■□□□ 1.66
CFAP43Q8NDM7 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
CFAP43Q8NDM7 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
CFAP43Q8NDM7 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC25.45■■□□□ 1.66
CFAP43Q8NDM7 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
CFAP43Q8NDM7 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC25.45■■□□□ 1.66
CFAP43Q8NDM7 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC25.45■■□□□ 1.66
CFAP43Q8NDM7 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC25.45■■□□□ 1.66
CFAP43Q8NDM7 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC25.45■■□□□ 1.66
CFAP43Q8NDM7 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC25.45■■□□□ 1.66
CFAP43Q8NDM7 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC25.45■■□□□ 1.66
CFAP43Q8NDM7 AC018665.1-201ENST00000622927 1362 ntBASIC25.45■■□□□ 1.66
CFAP43Q8NDM7 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC25.44■■□□□ 1.66
CFAP43Q8NDM7 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CFAP43Q8NDM7 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CFAP43Q8NDM7 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC25.44■■□□□ 1.66
CFAP43Q8NDM7 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
CFAP43Q8NDM7 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC25.44■■□□□ 1.66
CFAP43Q8NDM7 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC25.44■■□□□ 1.66
CFAP43Q8NDM7 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC25.44■■□□□ 1.66
CFAP43Q8NDM7 LETM1P2-201ENST00000597330 2178 ntBASIC25.44■■□□□ 1.66
CFAP43Q8NDM7 IMPDH1P4-201ENST00000445028 1534 ntBASIC25.44■■□□□ 1.66
CFAP43Q8NDM7 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CFAP43Q8NDM7 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC25.44■■□□□ 1.66
CFAP43Q8NDM7 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CFAP43Q8NDM7 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CFAP43Q8NDM7 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
CFAP43Q8NDM7 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC25.43■■□□□ 1.66
CFAP43Q8NDM7 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC25.43■■□□□ 1.66
CFAP43Q8NDM7 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC25.43■■□□□ 1.66
CFAP43Q8NDM7 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC25.43■■□□□ 1.66
CFAP43Q8NDM7 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
CFAP43Q8NDM7 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC25.43■■□□□ 1.66
CFAP43Q8NDM7 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC25.43■■□□□ 1.66
CFAP43Q8NDM7 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC25.43■■□□□ 1.66
CFAP43Q8NDM7 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC25.43■■□□□ 1.66
CFAP43Q8NDM7 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
CFAP43Q8NDM7 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
CFAP43Q8NDM7 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC25.43■■□□□ 1.66
CFAP43Q8NDM7 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
CFAP43Q8NDM7 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
CFAP43Q8NDM7 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
CFAP43Q8NDM7 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC25.43■■□□□ 1.66
CFAP43Q8NDM7 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC25.43■■□□□ 1.66
CFAP43Q8NDM7 PKD1P6-201ENST00000343738 4769 ntBASIC25.42■■□□□ 1.66
CFAP43Q8NDM7 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
CFAP43Q8NDM7 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
CFAP43Q8NDM7 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC25.42■■□□□ 1.66
CFAP43Q8NDM7 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC25.42■■□□□ 1.66
CFAP43Q8NDM7 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC25.42■■□□□ 1.66
CFAP43Q8NDM7 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC25.42■■□□□ 1.66
CFAP43Q8NDM7 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC25.42■■□□□ 1.66
CFAP43Q8NDM7 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC25.42■■□□□ 1.66
CFAP43Q8NDM7 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC25.42■■□□□ 1.66
CFAP43Q8NDM7 TMEM261P1-201ENST00000604899 340 ntBASIC25.42■■□□□ 1.66
CFAP43Q8NDM7 AC244093.1-201ENST00000610837 814 ntBASIC25.42■■□□□ 1.66
CFAP43Q8NDM7 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
CFAP43Q8NDM7 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
CFAP43Q8NDM7 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC25.42■■□□□ 1.66
CFAP43Q8NDM7 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
CFAP43Q8NDM7 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC25.42■■□□□ 1.66
CFAP43Q8NDM7 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC25.42■■□□□ 1.66
CFAP43Q8NDM7 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
CFAP43Q8NDM7 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC25.42■■□□□ 1.66
CFAP43Q8NDM7 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC25.42■■□□□ 1.66
CFAP43Q8NDM7 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
CFAP43Q8NDM7 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms