Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC16.93■□□□□ 0.3
SIX5Q8N196 FAM220BP-201ENST00000377689 816 ntBASIC16.93■□□□□ 0.3
SIX5Q8N196 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
SIX5Q8N196 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC16.93■□□□□ 0.3
SIX5Q8N196 AL080243.2-201ENST00000418783 582 ntBASIC16.93■□□□□ 0.3
SIX5Q8N196 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC16.93■□□□□ 0.3
SIX5Q8N196 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC16.93■□□□□ 0.3
SIX5Q8N196 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.93■□□□□ 0.3
SIX5Q8N196 SPTSSB-204ENST00000617024 1292 ntBASIC16.93■□□□□ 0.3
SIX5Q8N196 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SIX5Q8N196 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SIX5Q8N196 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SIX5Q8N196 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SIX5Q8N196 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SIX5Q8N196 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
SIX5Q8N196 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.93■□□□□ 0.3
SIX5Q8N196 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
SIX5Q8N196 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC16.93■□□□□ 0.3
SIX5Q8N196 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SIX5Q8N196 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SIX5Q8N196 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SIX5Q8N196 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SIX5Q8N196 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.92■□□□□ 0.3
SIX5Q8N196 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SIX5Q8N196 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
SIX5Q8N196 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SIX5Q8N196 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.92■□□□□ 0.3
SIX5Q8N196 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SIX5Q8N196 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
SIX5Q8N196 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.92■□□□□ 0.3
SIX5Q8N196 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
SIX5Q8N196 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SIX5Q8N196 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SIX5Q8N196 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.92■□□□□ 0.3
SIX5Q8N196 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
SIX5Q8N196 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SIX5Q8N196 RN7SL837P-201ENST00000463010 287 ntBASIC16.92■□□□□ 0.3
SIX5Q8N196 RN7SL618P-201ENST00000477850 296 ntBASIC16.92■□□□□ 0.3
SIX5Q8N196 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SIX5Q8N196 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.92■□□□□ 0.3
SIX5Q8N196 ZNF890P-202ENST00000530367 1156 ntBASIC16.92■□□□□ 0.3
SIX5Q8N196 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.92■□□□□ 0.3
SIX5Q8N196 AL512343.1-201ENST00000605837 169 ntBASIC16.92■□□□□ 0.3
SIX5Q8N196 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.92■□□□□ 0.3
SIX5Q8N196 AC004790.1-201ENST00000612686 536 ntBASIC16.92■□□□□ 0.3
SIX5Q8N196 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.92■□□□□ 0.3
SIX5Q8N196 AL033527.4-201ENST00000641026 673 ntBASIC16.92■□□□□ 0.3
SIX5Q8N196 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SIX5Q8N196 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SIX5Q8N196 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SIX5Q8N196 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SIX5Q8N196 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SIX5Q8N196 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SIX5Q8N196 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SIX5Q8N196 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.92■□□□□ 0.3
SIX5Q8N196 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SIX5Q8N196 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.92■□□□□ 0.3
SIX5Q8N196 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
SIX5Q8N196 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SIX5Q8N196 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
SIX5Q8N196 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
SIX5Q8N196 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SIX5Q8N196 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SIX5Q8N196 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SIX5Q8N196 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.91■□□□□ 0.3
SIX5Q8N196 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.91■□□□□ 0.3
SIX5Q8N196 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SIX5Q8N196 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SIX5Q8N196 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
SIX5Q8N196 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SIX5Q8N196 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC16.91■□□□□ 0.3
SIX5Q8N196 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.91■□□□□ 0.3
SIX5Q8N196 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC16.91■□□□□ 0.3
SIX5Q8N196 GLI4-203ENST00000517468 963 ntTSL 5 BASIC16.91■□□□□ 0.3
SIX5Q8N196 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SIX5Q8N196 AC092552.1-201ENST00000547243 906 ntBASIC16.91■□□□□ 0.3
SIX5Q8N196 BANF1P1-201ENST00000553684 263 ntBASIC16.91■□□□□ 0.3
SIX5Q8N196 MIR4525-201ENST00000580000 75 ntBASIC16.91■□□□□ 0.3
SIX5Q8N196 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.91■□□□□ 0.3
SIX5Q8N196 SNX12-206ENST00000622259 661 ntTSL 5 BASIC16.91■□□□□ 0.3
SIX5Q8N196 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
SIX5Q8N196 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SIX5Q8N196 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SIX5Q8N196 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
SIX5Q8N196 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.91■□□□□ 0.3
SIX5Q8N196 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SIX5Q8N196 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SIX5Q8N196 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
SIX5Q8N196 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SIX5Q8N196 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
SIX5Q8N196 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
SIX5Q8N196 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.91■□□□□ 0.3
SIX5Q8N196 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SIX5Q8N196 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.91■□□□□ 0.3
SIX5Q8N196 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
SIX5Q8N196 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SIX5Q8N196 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SIX5Q8N196 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SIX5Q8N196 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SIX5Q8N196 EGFEM1P-202ENST00000431685 1563 ntBASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms