Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
APLFQ8IW19 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
APLFQ8IW19 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
APLFQ8IW19 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.51■□□□□ 0.23
APLFQ8IW19 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.51■□□□□ 0.23
APLFQ8IW19 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
APLFQ8IW19 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.51■□□□□ 0.23
APLFQ8IW19 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
APLFQ8IW19 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
APLFQ8IW19 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
APLFQ8IW19 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
APLFQ8IW19 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
APLFQ8IW19 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
APLFQ8IW19 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.51■□□□□ 0.23
APLFQ8IW19 AC116353.5-201ENST00000638148 1699 ntBASIC16.51■□□□□ 0.23
APLFQ8IW19 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
APLFQ8IW19 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
APLFQ8IW19 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
APLFQ8IW19 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
APLFQ8IW19 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
APLFQ8IW19 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
APLFQ8IW19 YBX2P1-201ENST00000394192 760 ntBASIC16.51■□□□□ 0.23
APLFQ8IW19 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.51■□□□□ 0.23
APLFQ8IW19 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.51■□□□□ 0.23
APLFQ8IW19 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
APLFQ8IW19 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.51■□□□□ 0.23
APLFQ8IW19 DUTP2-201ENST00000519164 463 ntBASIC16.51■□□□□ 0.23
APLFQ8IW19 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.51■□□□□ 0.23
APLFQ8IW19 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
APLFQ8IW19 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
APLFQ8IW19 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
APLFQ8IW19 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
APLFQ8IW19 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
APLFQ8IW19 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
APLFQ8IW19 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
APLFQ8IW19 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
APLFQ8IW19 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.51■□□□□ 0.23
APLFQ8IW19 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
APLFQ8IW19 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
APLFQ8IW19 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
APLFQ8IW19 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
APLFQ8IW19 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
APLFQ8IW19 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
APLFQ8IW19 AC132938.6-201ENST00000623828 1655 ntBASIC16.5■□□□□ 0.23
APLFQ8IW19 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
APLFQ8IW19 AC079776.2-201ENST00000641154 1609 ntBASIC16.5■□□□□ 0.23
APLFQ8IW19 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
APLFQ8IW19 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
APLFQ8IW19 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.5■□□□□ 0.23
APLFQ8IW19 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.5■□□□□ 0.23
APLFQ8IW19 AC007967.3-201ENST00000434308 558 ntBASIC16.5■□□□□ 0.23
APLFQ8IW19 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.5■□□□□ 0.23
APLFQ8IW19 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
APLFQ8IW19 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.5■□□□□ 0.23
APLFQ8IW19 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.5■□□□□ 0.23
APLFQ8IW19 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.5■□□□□ 0.23
APLFQ8IW19 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.5■□□□□ 0.23
APLFQ8IW19 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.5■□□□□ 0.23
APLFQ8IW19 PGM5P2-202ENST00000637225 1043 ntBASIC16.5■□□□□ 0.23
APLFQ8IW19 AC079781.4-201ENST00000641908 219 ntBASIC16.5■□□□□ 0.23
APLFQ8IW19 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
APLFQ8IW19 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
APLFQ8IW19 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.5■□□□□ 0.23
APLFQ8IW19 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
APLFQ8IW19 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.5■□□□□ 0.23
APLFQ8IW19 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.5■□□□□ 0.23
APLFQ8IW19 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
APLFQ8IW19 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
APLFQ8IW19 GRK6P1-201ENST00000400595 1711 ntBASIC16.5■□□□□ 0.23
APLFQ8IW19 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
APLFQ8IW19 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
APLFQ8IW19 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
APLFQ8IW19 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
APLFQ8IW19 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
APLFQ8IW19 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
APLFQ8IW19 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
APLFQ8IW19 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
APLFQ8IW19 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
APLFQ8IW19 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.49■□□□□ 0.23
APLFQ8IW19 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
APLFQ8IW19 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.49■□□□□ 0.23
APLFQ8IW19 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
APLFQ8IW19 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
APLFQ8IW19 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
APLFQ8IW19 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.49■□□□□ 0.23
APLFQ8IW19 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
APLFQ8IW19 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.49■□□□□ 0.23
APLFQ8IW19 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.49■□□□□ 0.23
APLFQ8IW19 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.49■□□□□ 0.23
APLFQ8IW19 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.49■□□□□ 0.23
APLFQ8IW19 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
APLFQ8IW19 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.49■□□□□ 0.23
APLFQ8IW19 AC004832.2-201ENST00000426397 482 ntBASIC16.49■□□□□ 0.23
APLFQ8IW19 PRYP5-201ENST00000451909 266 ntBASIC16.49■□□□□ 0.23
APLFQ8IW19 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.49■□□□□ 0.23
APLFQ8IW19 AC016396.2-201ENST00000562575 1417 ntBASIC16.49■□□□□ 0.23
APLFQ8IW19 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.49■□□□□ 0.23
APLFQ8IW19 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
APLFQ8IW19 AC010327.4-202ENST00000591484 748 ntBASIC16.49■□□□□ 0.23
APLFQ8IW19 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms