Protein–RNA interactions for Protein: Q8IV35

WDR49, WD repeat-containing protein 49, humanhuman

Predictions only

Length 697 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WDR49Q8IV35 AC079781.4-201ENST00000641908 219 ntBASIC17.78■□□□□ 0.44
WDR49Q8IV35 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.78■□□□□ 0.44
WDR49Q8IV35 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
WDR49Q8IV35 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.78■□□□□ 0.44
WDR49Q8IV35 AC084018.2-201ENST00000613093 2607 ntBASIC17.78■□□□□ 0.44
WDR49Q8IV35 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
WDR49Q8IV35 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
WDR49Q8IV35 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
WDR49Q8IV35 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
WDR49Q8IV35 AC005622.1-201ENST00000636801 1703 ntBASIC17.78■□□□□ 0.44
WDR49Q8IV35 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
WDR49Q8IV35 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
WDR49Q8IV35 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
WDR49Q8IV35 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.77■□□□□ 0.44
WDR49Q8IV35 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
WDR49Q8IV35 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
WDR49Q8IV35 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.77■□□□□ 0.44
WDR49Q8IV35 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.77■□□□□ 0.44
WDR49Q8IV35 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.77■□□□□ 0.44
WDR49Q8IV35 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
WDR49Q8IV35 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
WDR49Q8IV35 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
WDR49Q8IV35 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
WDR49Q8IV35 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
WDR49Q8IV35 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
WDR49Q8IV35 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.77■□□□□ 0.44
WDR49Q8IV35 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.77■□□□□ 0.44
WDR49Q8IV35 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.77■□□□□ 0.44
WDR49Q8IV35 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.77■□□□□ 0.44
WDR49Q8IV35 AC142381.1-201ENST00000426099 345 ntBASIC17.77■□□□□ 0.44
WDR49Q8IV35 CNN2P11-201ENST00000429351 262 ntBASIC17.77■□□□□ 0.44
WDR49Q8IV35 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.77■□□□□ 0.44
WDR49Q8IV35 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
WDR49Q8IV35 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.77■□□□□ 0.44
WDR49Q8IV35 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
WDR49Q8IV35 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
WDR49Q8IV35 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.77■□□□□ 0.44
WDR49Q8IV35 SNHG9-202ENST00000564014 471 ntBASIC17.77■□□□□ 0.44
WDR49Q8IV35 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
WDR49Q8IV35 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.77■□□□□ 0.44
WDR49Q8IV35 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
WDR49Q8IV35 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
WDR49Q8IV35 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.77■□□□□ 0.44
WDR49Q8IV35 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.77■□□□□ 0.44
WDR49Q8IV35 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
WDR49Q8IV35 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
WDR49Q8IV35 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
WDR49Q8IV35 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
WDR49Q8IV35 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
WDR49Q8IV35 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.77■□□□□ 0.43
WDR49Q8IV35 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.77■□□□□ 0.43
WDR49Q8IV35 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
WDR49Q8IV35 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
WDR49Q8IV35 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
WDR49Q8IV35 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.77■□□□□ 0.43
WDR49Q8IV35 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
WDR49Q8IV35 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
WDR49Q8IV35 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.76■□□□□ 0.43
WDR49Q8IV35 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.76■□□□□ 0.43
WDR49Q8IV35 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
WDR49Q8IV35 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.76■□□□□ 0.43
WDR49Q8IV35 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
WDR49Q8IV35 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
WDR49Q8IV35 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
WDR49Q8IV35 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
WDR49Q8IV35 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
WDR49Q8IV35 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
WDR49Q8IV35 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
WDR49Q8IV35 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.76■□□□□ 0.43
WDR49Q8IV35 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
WDR49Q8IV35 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
WDR49Q8IV35 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
WDR49Q8IV35 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
WDR49Q8IV35 AL627223.1-201ENST00000416693 442 ntBASIC17.76■□□□□ 0.43
WDR49Q8IV35 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.76■□□□□ 0.43
WDR49Q8IV35 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.76■□□□□ 0.43
WDR49Q8IV35 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.76■□□□□ 0.43
WDR49Q8IV35 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.76■□□□□ 0.43
WDR49Q8IV35 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.76■□□□□ 0.43
WDR49Q8IV35 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
WDR49Q8IV35 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.76■□□□□ 0.43
WDR49Q8IV35 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.76■□□□□ 0.43
WDR49Q8IV35 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.76■□□□□ 0.43
WDR49Q8IV35 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.76■□□□□ 0.43
WDR49Q8IV35 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.76■□□□□ 0.43
WDR49Q8IV35 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
WDR49Q8IV35 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
WDR49Q8IV35 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.76■□□□□ 0.43
WDR49Q8IV35 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
WDR49Q8IV35 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.76■□□□□ 0.43
WDR49Q8IV35 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
WDR49Q8IV35 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.76■□□□□ 0.43
WDR49Q8IV35 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
WDR49Q8IV35 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.76■□□□□ 0.43
WDR49Q8IV35 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
WDR49Q8IV35 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
WDR49Q8IV35 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
WDR49Q8IV35 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
WDR49Q8IV35 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
WDR49Q8IV35 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms