Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.23■□□□□ 0.19
LRRTM4Q86VH4 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRRTM4Q86VH4 AC073389.1-201ENST00000595595 795 ntBASIC16.23■□□□□ 0.19
LRRTM4Q86VH4 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.23■□□□□ 0.19
LRRTM4Q86VH4 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.23■□□□□ 0.19
LRRTM4Q86VH4 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.23■□□□□ 0.19
LRRTM4Q86VH4 AC084121.4-201ENST00000641598 221 ntBASIC16.23■□□□□ 0.19
LRRTM4Q86VH4 AF228730.8-201ENST00000642140 221 ntBASIC16.23■□□□□ 0.19
LRRTM4Q86VH4 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRRTM4Q86VH4 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
LRRTM4Q86VH4 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRRTM4Q86VH4 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.23■□□□□ 0.19
LRRTM4Q86VH4 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRRTM4Q86VH4 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRRTM4Q86VH4 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.23■□□□□ 0.19
LRRTM4Q86VH4 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
LRRTM4Q86VH4 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRRTM4Q86VH4 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
LRRTM4Q86VH4 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
LRRTM4Q86VH4 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRRTM4Q86VH4 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRRTM4Q86VH4 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
LRRTM4Q86VH4 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.23■□□□□ 0.19
LRRTM4Q86VH4 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRRTM4Q86VH4 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.23■□□□□ 0.19
LRRTM4Q86VH4 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRTM4Q86VH4 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRTM4Q86VH4 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRTM4Q86VH4 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRTM4Q86VH4 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRTM4Q86VH4 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
LRRTM4Q86VH4 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LRRTM4Q86VH4 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRTM4Q86VH4 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRTM4Q86VH4 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LRRTM4Q86VH4 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.22■□□□□ 0.19
LRRTM4Q86VH4 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LRRTM4Q86VH4 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRTM4Q86VH4 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRTM4Q86VH4 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LRRTM4Q86VH4 MIR346-201ENST00000362234 95 ntBASIC16.22■□□□□ 0.19
LRRTM4Q86VH4 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.22■□□□□ 0.19
LRRTM4Q86VH4 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.22■□□□□ 0.19
LRRTM4Q86VH4 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.22■□□□□ 0.19
LRRTM4Q86VH4 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LRRTM4Q86VH4 SLC25A39P2-201ENST00000537614 270 ntBASIC16.22■□□□□ 0.19
LRRTM4Q86VH4 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.22■□□□□ 0.19
LRRTM4Q86VH4 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.22■□□□□ 0.19
LRRTM4Q86VH4 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.22■□□□□ 0.19
LRRTM4Q86VH4 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.22■□□□□ 0.19
LRRTM4Q86VH4 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
LRRTM4Q86VH4 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.22■□□□□ 0.19
LRRTM4Q86VH4 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
LRRTM4Q86VH4 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
LRRTM4Q86VH4 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.22■□□□□ 0.19
LRRTM4Q86VH4 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.22■□□□□ 0.19
LRRTM4Q86VH4 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
LRRTM4Q86VH4 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LRRTM4Q86VH4 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.22■□□□□ 0.19
LRRTM4Q86VH4 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRTM4Q86VH4 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRTM4Q86VH4 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LRRTM4Q86VH4 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
LRRTM4Q86VH4 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRRTM4Q86VH4 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
LRRTM4Q86VH4 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LRRTM4Q86VH4 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRRTM4Q86VH4 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRRTM4Q86VH4 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRRTM4Q86VH4 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRRTM4Q86VH4 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRRTM4Q86VH4 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRRTM4Q86VH4 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRRTM4Q86VH4 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LRRTM4Q86VH4 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LRRTM4Q86VH4 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LRRTM4Q86VH4 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.21■□□□□ 0.19
LRRTM4Q86VH4 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
LRRTM4Q86VH4 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRRTM4Q86VH4 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.21■□□□□ 0.19
LRRTM4Q86VH4 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LRRTM4Q86VH4 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRRTM4Q86VH4 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.21■□□□□ 0.19
LRRTM4Q86VH4 FAM58DP-201ENST00000428076 619 ntBASIC16.21■□□□□ 0.19
LRRTM4Q86VH4 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.21■□□□□ 0.19
LRRTM4Q86VH4 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.21■□□□□ 0.19
LRRTM4Q86VH4 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LRRTM4Q86VH4 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.21■□□□□ 0.19
LRRTM4Q86VH4 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LRRTM4Q86VH4 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.21■□□□□ 0.19
LRRTM4Q86VH4 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.19
LRRTM4Q86VH4 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
LRRTM4Q86VH4 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.21■□□□□ 0.19
LRRTM4Q86VH4 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.21■□□□□ 0.19
LRRTM4Q86VH4 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.21■□□□□ 0.19
LRRTM4Q86VH4 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRRTM4Q86VH4 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LRRTM4Q86VH4 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LRRTM4Q86VH4 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRRTM4Q86VH4 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms