Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
RNF44Q7L0R7 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RNF44Q7L0R7 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
RNF44Q7L0R7 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF44Q7L0R7 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
RNF44Q7L0R7 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF44Q7L0R7 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF44Q7L0R7 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF44Q7L0R7 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.89■□□□□ 0.13
RNF44Q7L0R7 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RNF44Q7L0R7 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF44Q7L0R7 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF44Q7L0R7 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF44Q7L0R7 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RNF44Q7L0R7 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
RNF44Q7L0R7 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF44Q7L0R7 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF44Q7L0R7 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF44Q7L0R7 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RNF44Q7L0R7 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
RNF44Q7L0R7 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RNF44Q7L0R7 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF44Q7L0R7 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RNF44Q7L0R7 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RNF44Q7L0R7 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF44Q7L0R7 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF44Q7L0R7 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
RNF44Q7L0R7 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RNF44Q7L0R7 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF44Q7L0R7 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RNF44Q7L0R7 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.88■□□□□ 0.13
RNF44Q7L0R7 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF44Q7L0R7 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RNF44Q7L0R7 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC15.88■□□□□ 0.13
RNF44Q7L0R7 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC15.88■□□□□ 0.13
RNF44Q7L0R7 SPDYE11-202ENST00000450699 704 ntBASIC15.88■□□□□ 0.13
RNF44Q7L0R7 TIMM8BP1-201ENST00000452384 211 ntBASIC15.88■□□□□ 0.13
RNF44Q7L0R7 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
RNF44Q7L0R7 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.88■□□□□ 0.13
RNF44Q7L0R7 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RNF44Q7L0R7 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.88■□□□□ 0.13
RNF44Q7L0R7 KRT8P48-201ENST00000515599 1220 ntBASIC15.88■□□□□ 0.13
RNF44Q7L0R7 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RNF44Q7L0R7 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.88■□□□□ 0.13
RNF44Q7L0R7 SPDYE9P-201ENST00000570642 692 ntBASIC15.88■□□□□ 0.13
RNF44Q7L0R7 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.88■□□□□ 0.13
RNF44Q7L0R7 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.88■□□□□ 0.13
RNF44Q7L0R7 SPDYE10P-202ENST00000612005 668 ntBASIC15.88■□□□□ 0.13
RNF44Q7L0R7 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
RNF44Q7L0R7 SPDYE8P-202ENST00000612377 668 ntBASIC15.88■□□□□ 0.13
RNF44Q7L0R7 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.88■□□□□ 0.13
RNF44Q7L0R7 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF44Q7L0R7 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
RNF44Q7L0R7 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.88■□□□□ 0.13
RNF44Q7L0R7 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF44Q7L0R7 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF44Q7L0R7 HLA-A-202ENST00000376806 1854 ntBASIC15.88■□□□□ 0.13
RNF44Q7L0R7 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF44Q7L0R7 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF44Q7L0R7 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
RNF44Q7L0R7 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.88■□□□□ 0.13
RNF44Q7L0R7 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC15.88■□□□□ 0.13
RNF44Q7L0R7 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.88■□□□□ 0.13
RNF44Q7L0R7 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RNF44Q7L0R7 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.88■□□□□ 0.13
RNF44Q7L0R7 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.87■□□□□ 0.13
RNF44Q7L0R7 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.87■□□□□ 0.13
RNF44Q7L0R7 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RNF44Q7L0R7 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC15.87■□□□□ 0.13
RNF44Q7L0R7 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RNF44Q7L0R7 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RNF44Q7L0R7 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RNF44Q7L0R7 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
RNF44Q7L0R7 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.87■□□□□ 0.13
RNF44Q7L0R7 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RNF44Q7L0R7 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RNF44Q7L0R7 AL031731.1-201ENST00000642131 2094 ntBASIC15.87■□□□□ 0.13
RNF44Q7L0R7 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RNF44Q7L0R7 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC15.87■□□□□ 0.13
RNF44Q7L0R7 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RNF44Q7L0R7 KRT18P34-201ENST00000488218 1270 ntBASIC15.87■□□□□ 0.13
RNF44Q7L0R7 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
RNF44Q7L0R7 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC15.87■□□□□ 0.13
RNF44Q7L0R7 AC243562.1-201ENST00000560672 389 ntBASIC15.87■□□□□ 0.13
RNF44Q7L0R7 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.87■□□□□ 0.13
RNF44Q7L0R7 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RNF44Q7L0R7 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.87■□□□□ 0.13
RNF44Q7L0R7 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RNF44Q7L0R7 AP001160.2-201ENST00000596071 487 ntBASIC15.87■□□□□ 0.13
RNF44Q7L0R7 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC15.87■□□□□ 0.13
RNF44Q7L0R7 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC15.87■□□□□ 0.13
RNF44Q7L0R7 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RNF44Q7L0R7 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.87■□□□□ 0.13
RNF44Q7L0R7 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
RNF44Q7L0R7 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.87■□□□□ 0.13
RNF44Q7L0R7 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
RNF44Q7L0R7 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.87■□□□□ 0.13
RNF44Q7L0R7 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RNF44Q7L0R7 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RNF44Q7L0R7 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms