Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SHC4Q6S5L8 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC18.67■□□□□ 0.58
SHC4Q6S5L8 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC18.67■□□□□ 0.58
SHC4Q6S5L8 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SHC4Q6S5L8 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SHC4Q6S5L8 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC18.67■□□□□ 0.58
SHC4Q6S5L8 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SHC4Q6S5L8 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SHC4Q6S5L8 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SHC4Q6S5L8 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SHC4Q6S5L8 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SHC4Q6S5L8 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SHC4Q6S5L8 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
SHC4Q6S5L8 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC18.66■□□□□ 0.58
SHC4Q6S5L8 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
SHC4Q6S5L8 AL592424.1-201ENST00000563624 1536 ntBASIC18.66■□□□□ 0.58
SHC4Q6S5L8 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SHC4Q6S5L8 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC18.66■□□□□ 0.58
SHC4Q6S5L8 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
SHC4Q6S5L8 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SHC4Q6S5L8 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.66■□□□□ 0.58
SHC4Q6S5L8 ATP6V0CP3-201ENST00000417255 467 ntBASIC18.66■□□□□ 0.58
SHC4Q6S5L8 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC18.66■□□□□ 0.58
SHC4Q6S5L8 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.66■□□□□ 0.58
SHC4Q6S5L8 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
SHC4Q6S5L8 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.66■□□□□ 0.58
SHC4Q6S5L8 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC18.66■□□□□ 0.58
SHC4Q6S5L8 RPL28-209ENST00000560055 670 ntTSL 3 BASIC18.66■□□□□ 0.58
SHC4Q6S5L8 AL031432.2-201ENST00000566714 459 ntBASIC18.66■□□□□ 0.58
SHC4Q6S5L8 AL928711.1-201ENST00000570165 459 ntBASIC18.66■□□□□ 0.58
SHC4Q6S5L8 AL645728.2-201ENST00000641974 660 ntBASIC18.66■□□□□ 0.58
SHC4Q6S5L8 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SHC4Q6S5L8 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
SHC4Q6S5L8 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SHC4Q6S5L8 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.66■□□□□ 0.58
SHC4Q6S5L8 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SHC4Q6S5L8 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
SHC4Q6S5L8 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SHC4Q6S5L8 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC18.66■□□□□ 0.58
SHC4Q6S5L8 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SHC4Q6S5L8 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
SHC4Q6S5L8 CDC14C-201ENST00000428251 1719 ntBASIC18.66■□□□□ 0.58
SHC4Q6S5L8 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
SHC4Q6S5L8 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC18.66■□□□□ 0.58
SHC4Q6S5L8 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC18.66■□□□□ 0.58
SHC4Q6S5L8 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SHC4Q6S5L8 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SHC4Q6S5L8 AC112504.1-201ENST00000623415 1841 ntBASIC18.65■□□□□ 0.58
SHC4Q6S5L8 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC18.65■□□□□ 0.58
SHC4Q6S5L8 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
SHC4Q6S5L8 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SHC4Q6S5L8 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC18.65■□□□□ 0.58
SHC4Q6S5L8 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SHC4Q6S5L8 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.65■□□□□ 0.58
SHC4Q6S5L8 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SHC4Q6S5L8 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SHC4Q6S5L8 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SHC4Q6S5L8 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SHC4Q6S5L8 AC009078.2-202ENST00000463353 338 ntBASIC18.65■□□□□ 0.58
SHC4Q6S5L8 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18.65■□□□□ 0.58
SHC4Q6S5L8 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.65■□□□□ 0.58
SHC4Q6S5L8 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.65■□□□□ 0.58
SHC4Q6S5L8 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
SHC4Q6S5L8 TCAP-202ENST00000578283 583 ntTSL 5 BASIC18.65■□□□□ 0.58
SHC4Q6S5L8 MIR3909-201ENST00000579518 119 ntBASIC18.65■□□□□ 0.58
SHC4Q6S5L8 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC18.65■□□□□ 0.58
SHC4Q6S5L8 AC010507.1-201ENST00000633895 436 ntBASIC18.65■□□□□ 0.58
SHC4Q6S5L8 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SHC4Q6S5L8 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SHC4Q6S5L8 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SHC4Q6S5L8 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SHC4Q6S5L8 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC18.65■□□□□ 0.58
SHC4Q6S5L8 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SHC4Q6S5L8 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
SHC4Q6S5L8 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
SHC4Q6S5L8 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SHC4Q6S5L8 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SHC4Q6S5L8 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SHC4Q6S5L8 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC18.65■□□□□ 0.58
SHC4Q6S5L8 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
SHC4Q6S5L8 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SHC4Q6S5L8 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
SHC4Q6S5L8 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
SHC4Q6S5L8 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
SHC4Q6S5L8 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC18.64■□□□□ 0.58
SHC4Q6S5L8 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SHC4Q6S5L8 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC18.64■□□□□ 0.57
SHC4Q6S5L8 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SHC4Q6S5L8 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC18.64■□□□□ 0.57
SHC4Q6S5L8 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SHC4Q6S5L8 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC18.64■□□□□ 0.57
SHC4Q6S5L8 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
SHC4Q6S5L8 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SHC4Q6S5L8 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SHC4Q6S5L8 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC18.64■□□□□ 0.57
SHC4Q6S5L8 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.64■□□□□ 0.57
SHC4Q6S5L8 RHOQP3-201ENST00000437982 621 ntBASIC18.64■□□□□ 0.57
SHC4Q6S5L8 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.64■□□□□ 0.57
SHC4Q6S5L8 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SHC4Q6S5L8 AP001005.1-201ENST00000571755 1248 ntBASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms