Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CNKSR3Q6P9H4 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNKSR3Q6P9H4 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
CNKSR3Q6P9H4 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNKSR3Q6P9H4 FO393414.2-201ENST00000405153 598 ntBASIC17.62■□□□□ 0.41
CNKSR3Q6P9H4 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CNKSR3Q6P9H4 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC17.62■□□□□ 0.41
CNKSR3Q6P9H4 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC17.62■□□□□ 0.41
CNKSR3Q6P9H4 SNX29P1-201ENST00000548357 1007 ntBASIC17.62■□□□□ 0.41
CNKSR3Q6P9H4 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC17.62■□□□□ 0.41
CNKSR3Q6P9H4 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC17.62■□□□□ 0.41
CNKSR3Q6P9H4 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC17.62■□□□□ 0.41
CNKSR3Q6P9H4 AC067852.2-201ENST00000590513 2313 ntBASIC17.62■□□□□ 0.41
CNKSR3Q6P9H4 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNKSR3Q6P9H4 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CNKSR3Q6P9H4 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CNKSR3Q6P9H4 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNKSR3Q6P9H4 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
CNKSR3Q6P9H4 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
CNKSR3Q6P9H4 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.62■□□□□ 0.41
CNKSR3Q6P9H4 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CNKSR3Q6P9H4 CLK3P2-201ENST00000427566 1453 ntBASIC17.62■□□□□ 0.41
CNKSR3Q6P9H4 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
CNKSR3Q6P9H4 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC17.62■□□□□ 0.41
CNKSR3Q6P9H4 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CNKSR3Q6P9H4 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNKSR3Q6P9H4 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CNKSR3Q6P9H4 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC17.61■□□□□ 0.41
CNKSR3Q6P9H4 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNKSR3Q6P9H4 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CNKSR3Q6P9H4 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.61■□□□□ 0.41
CNKSR3Q6P9H4 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNKSR3Q6P9H4 AL031731.1-201ENST00000642131 2094 ntBASIC17.61■□□□□ 0.41
CNKSR3Q6P9H4 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC17.61■□□□□ 0.41
CNKSR3Q6P9H4 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CNKSR3Q6P9H4 NOP2-211ENST00000540228 668 ntTSL 2 BASIC17.61■□□□□ 0.41
CNKSR3Q6P9H4 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNKSR3Q6P9H4 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CNKSR3Q6P9H4 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CNKSR3Q6P9H4 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNKSR3Q6P9H4 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNKSR3Q6P9H4 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.61■□□□□ 0.41
CNKSR3Q6P9H4 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNKSR3Q6P9H4 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CNKSR3Q6P9H4 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
CNKSR3Q6P9H4 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNKSR3Q6P9H4 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CNKSR3Q6P9H4 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNKSR3Q6P9H4 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.61■□□□□ 0.41
CNKSR3Q6P9H4 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CNKSR3Q6P9H4 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CNKSR3Q6P9H4 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CNKSR3Q6P9H4 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNKSR3Q6P9H4 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNKSR3Q6P9H4 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CNKSR3Q6P9H4 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.6■□□□□ 0.41
CNKSR3Q6P9H4 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.6■□□□□ 0.41
CNKSR3Q6P9H4 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CNKSR3Q6P9H4 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CNKSR3Q6P9H4 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CNKSR3Q6P9H4 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
CNKSR3Q6P9H4 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CNKSR3Q6P9H4 RPF1-202ENST00000370656 724 ntTSL 2 BASIC17.6■□□□□ 0.41
CNKSR3Q6P9H4 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
CNKSR3Q6P9H4 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CNKSR3Q6P9H4 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC17.6■□□□□ 0.41
CNKSR3Q6P9H4 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC17.6■□□□□ 0.41
CNKSR3Q6P9H4 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC17.6■□□□□ 0.41
CNKSR3Q6P9H4 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC17.6■□□□□ 0.41
CNKSR3Q6P9H4 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC17.6■□□□□ 0.41
CNKSR3Q6P9H4 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC17.6■□□□□ 0.41
CNKSR3Q6P9H4 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
CNKSR3Q6P9H4 PIGL-212ENST00000581006 554 ntTSL 4 BASIC17.6■□□□□ 0.41
CNKSR3Q6P9H4 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC17.6■□□□□ 0.41
CNKSR3Q6P9H4 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CNKSR3Q6P9H4 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CNKSR3Q6P9H4 CDC14C-201ENST00000428251 1719 ntBASIC17.6■□□□□ 0.41
CNKSR3Q6P9H4 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CNKSR3Q6P9H4 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CNKSR3Q6P9H4 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CNKSR3Q6P9H4 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CNKSR3Q6P9H4 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CNKSR3Q6P9H4 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CNKSR3Q6P9H4 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CNKSR3Q6P9H4 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CNKSR3Q6P9H4 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CNKSR3Q6P9H4 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CNKSR3Q6P9H4 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.59■□□□□ 0.41
CNKSR3Q6P9H4 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CNKSR3Q6P9H4 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
CNKSR3Q6P9H4 REXO1L6P-201ENST00000603433 1515 ntBASIC17.59■□□□□ 0.41
CNKSR3Q6P9H4 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.59■□□□□ 0.41
CNKSR3Q6P9H4 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CNKSR3Q6P9H4 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CNKSR3Q6P9H4 KRT43P-201ENST00000434019 910 ntBASIC17.59■□□□□ 0.41
CNKSR3Q6P9H4 CROCCP4-201ENST00000457096 498 ntBASIC17.59■□□□□ 0.41
CNKSR3Q6P9H4 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC17.59■□□□□ 0.41
CNKSR3Q6P9H4 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC17.59■□□□□ 0.41
CNKSR3Q6P9H4 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CNKSR3Q6P9H4 AC104989.1-201ENST00000519711 778 ntBASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms