Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.67■□□□□ 0.42
CTC1Q2NKJ3 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTC1Q2NKJ3 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC17.67■□□□□ 0.42
CTC1Q2NKJ3 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC17.67■□□□□ 0.42
CTC1Q2NKJ3 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC17.67■□□□□ 0.42
CTC1Q2NKJ3 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTC1Q2NKJ3 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC17.67■□□□□ 0.42
CTC1Q2NKJ3 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTC1Q2NKJ3 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTC1Q2NKJ3 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.67■□□□□ 0.42
CTC1Q2NKJ3 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CTC1Q2NKJ3 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTC1Q2NKJ3 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTC1Q2NKJ3 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
CTC1Q2NKJ3 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
CTC1Q2NKJ3 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTC1Q2NKJ3 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CTC1Q2NKJ3 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTC1Q2NKJ3 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTC1Q2NKJ3 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.66■□□□□ 0.42
CTC1Q2NKJ3 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.66■□□□□ 0.42
CTC1Q2NKJ3 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTC1Q2NKJ3 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.66■□□□□ 0.42
CTC1Q2NKJ3 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CTC1Q2NKJ3 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CTC1Q2NKJ3 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CTC1Q2NKJ3 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTC1Q2NKJ3 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC17.66■□□□□ 0.42
CTC1Q2NKJ3 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC17.66■□□□□ 0.42
CTC1Q2NKJ3 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CTC1Q2NKJ3 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC17.66■□□□□ 0.42
CTC1Q2NKJ3 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CTC1Q2NKJ3 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC17.66■□□□□ 0.42
CTC1Q2NKJ3 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC17.66■□□□□ 0.42
CTC1Q2NKJ3 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC17.66■□□□□ 0.42
CTC1Q2NKJ3 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CTC1Q2NKJ3 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTC1Q2NKJ3 AC140912.1-201ENST00000577171 1054 ntBASIC17.66■□□□□ 0.42
CTC1Q2NKJ3 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC17.66■□□□□ 0.42
CTC1Q2NKJ3 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC17.66■□□□□ 0.42
CTC1Q2NKJ3 AL132655.2-201ENST00000596276 594 ntBASIC17.66■□□□□ 0.42
CTC1Q2NKJ3 AC003101.2-201ENST00000612557 442 ntBASIC17.66■□□□□ 0.42
CTC1Q2NKJ3 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CTC1Q2NKJ3 AL162274.1-201ENST00000617191 1098 ntBASIC17.66■□□□□ 0.42
CTC1Q2NKJ3 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
CTC1Q2NKJ3 IGHV3-72-202ENST00000621503 303 ntBASIC17.66■□□□□ 0.42
CTC1Q2NKJ3 AC007541.1-201ENST00000570282 1469 ntBASIC17.66■□□□□ 0.42
CTC1Q2NKJ3 SLC22A20-204ENST00000530038 1673 ntBASIC17.66■□□□□ 0.42
CTC1Q2NKJ3 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.66■□□□□ 0.42
CTC1Q2NKJ3 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTC1Q2NKJ3 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.66■□□□□ 0.42
CTC1Q2NKJ3 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.66■□□□□ 0.42
CTC1Q2NKJ3 AC087499.5-201ENST00000452760 1342 ntBASIC17.66■□□□□ 0.42
CTC1Q2NKJ3 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTC1Q2NKJ3 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CTC1Q2NKJ3 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTC1Q2NKJ3 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CTC1Q2NKJ3 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
CTC1Q2NKJ3 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTC1Q2NKJ3 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC17.65■□□□□ 0.42
CTC1Q2NKJ3 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTC1Q2NKJ3 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CTC1Q2NKJ3 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CTC1Q2NKJ3 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.65■□□□□ 0.42
CTC1Q2NKJ3 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTC1Q2NKJ3 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTC1Q2NKJ3 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CTC1Q2NKJ3 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC17.65■□□□□ 0.42
CTC1Q2NKJ3 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CTC1Q2NKJ3 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.65■□□□□ 0.42
CTC1Q2NKJ3 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.65■□□□□ 0.42
CTC1Q2NKJ3 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
CTC1Q2NKJ3 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CTC1Q2NKJ3 AC008894.3-201ENST00000624324 3103 ntBASIC17.65■□□□□ 0.42
CTC1Q2NKJ3 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CTC1Q2NKJ3 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTC1Q2NKJ3 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC17.65■□□□□ 0.42
CTC1Q2NKJ3 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.65■□□□□ 0.42
CTC1Q2NKJ3 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC17.65■□□□□ 0.42
CTC1Q2NKJ3 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.65■□□□□ 0.42
CTC1Q2NKJ3 RPS2P32-201ENST00000439199 892 ntBASIC17.65■□□□□ 0.42
CTC1Q2NKJ3 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC17.65■□□□□ 0.42
CTC1Q2NKJ3 AC105233.2-201ENST00000523697 349 ntBASIC17.65■□□□□ 0.42
CTC1Q2NKJ3 AF228730.5-201ENST00000530288 346 ntBASIC17.65■□□□□ 0.42
CTC1Q2NKJ3 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.65■□□□□ 0.42
CTC1Q2NKJ3 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC17.65■□□□□ 0.42
CTC1Q2NKJ3 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
CTC1Q2NKJ3 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC17.65■□□□□ 0.42
CTC1Q2NKJ3 PRR29-204ENST00000577953 565 ntTSL 4 BASIC17.65■□□□□ 0.42
CTC1Q2NKJ3 AC073389.1-201ENST00000595595 795 ntBASIC17.65■□□□□ 0.42
CTC1Q2NKJ3 LINC01451-201ENST00000623792 534 ntBASIC17.65■□□□□ 0.42
CTC1Q2NKJ3 RAB34-223ENST00000636154 730 ntTSL 2 BASIC17.65■□□□□ 0.42
CTC1Q2NKJ3 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.65■□□□□ 0.42
CTC1Q2NKJ3 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTC1Q2NKJ3 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
CTC1Q2NKJ3 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTC1Q2NKJ3 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTC1Q2NKJ3 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTC1Q2NKJ3 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTC1Q2NKJ3 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms