Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SEC61A1P61619 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SEC61A1P61619 AC144831.1-201ENST00000573312 2656 ntBASIC14.59□□□□□ -0.07
SEC61A1P61619 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SEC61A1P61619 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SEC61A1P61619 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.59□□□□□ -0.07
SEC61A1P61619 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
SEC61A1P61619 AC148477.5-201ENST00000625164 1645 ntBASIC14.59□□□□□ -0.07
SEC61A1P61619 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SEC61A1P61619 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.59□□□□□ -0.07
SEC61A1P61619 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SEC61A1P61619 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
SEC61A1P61619 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SEC61A1P61619 AL353593.2-201ENST00000602529 1483 ntBASIC14.59□□□□□ -0.07
SEC61A1P61619 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SEC61A1P61619 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SEC61A1P61619 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SEC61A1P61619 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SEC61A1P61619 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SEC61A1P61619 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SEC61A1P61619 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
SEC61A1P61619 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
SEC61A1P61619 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SEC61A1P61619 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC14.59□□□□□ -0.07
SEC61A1P61619 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SEC61A1P61619 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SEC61A1P61619 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC14.59□□□□□ -0.07
SEC61A1P61619 SLC25A1P1-201ENST00000528351 927 ntBASIC14.59□□□□□ -0.07
SEC61A1P61619 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC14.59□□□□□ -0.07
SEC61A1P61619 RNF151-202ENST00000569210 853 ntTSL 2 BASIC14.59□□□□□ -0.07
SEC61A1P61619 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC14.59□□□□□ -0.07
SEC61A1P61619 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
SEC61A1P61619 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.59□□□□□ -0.07
SEC61A1P61619 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SEC61A1P61619 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
SEC61A1P61619 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SEC61A1P61619 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
SEC61A1P61619 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
SEC61A1P61619 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SEC61A1P61619 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.59□□□□□ -0.07
SEC61A1P61619 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SEC61A1P61619 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SEC61A1P61619 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SEC61A1P61619 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SEC61A1P61619 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
SEC61A1P61619 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC14.58□□□□□ -0.07
SEC61A1P61619 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
SEC61A1P61619 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
SEC61A1P61619 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SEC61A1P61619 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
SEC61A1P61619 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SEC61A1P61619 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SEC61A1P61619 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
SEC61A1P61619 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
SEC61A1P61619 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
SEC61A1P61619 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SEC61A1P61619 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
SEC61A1P61619 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC14.58□□□□□ -0.08
SEC61A1P61619 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC14.58□□□□□ -0.08
SEC61A1P61619 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.58□□□□□ -0.08
SEC61A1P61619 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SEC61A1P61619 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
SEC61A1P61619 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SEC61A1P61619 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
SEC61A1P61619 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC14.58□□□□□ -0.08
SEC61A1P61619 SPDYE21P-201ENST00000413323 827 ntBASIC14.58□□□□□ -0.08
SEC61A1P61619 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC14.58□□□□□ -0.08
SEC61A1P61619 OR7E14P-202ENST00000530490 1290 ntBASIC14.58□□□□□ -0.08
SEC61A1P61619 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC14.58□□□□□ -0.08
SEC61A1P61619 AC012640.2-201ENST00000561606 901 ntBASIC14.58□□□□□ -0.08
SEC61A1P61619 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
SEC61A1P61619 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC14.58□□□□□ -0.08
SEC61A1P61619 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC14.58□□□□□ -0.08
SEC61A1P61619 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC14.58□□□□□ -0.08
SEC61A1P61619 BX640515.1-201ENST00000617215 977 ntBASIC14.58□□□□□ -0.08
SEC61A1P61619 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SEC61A1P61619 NME4-212ENST00000621774 904 ntTSL 3 BASIC14.58□□□□□ -0.08
SEC61A1P61619 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
SEC61A1P61619 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
SEC61A1P61619 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SEC61A1P61619 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
SEC61A1P61619 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.58□□□□□ -0.08
SEC61A1P61619 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SEC61A1P61619 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SEC61A1P61619 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SEC61A1P61619 LINC02012-201ENST00000608206 1725 ntBASIC14.58□□□□□ -0.08
SEC61A1P61619 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
SEC61A1P61619 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SEC61A1P61619 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SEC61A1P61619 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SEC61A1P61619 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.57□□□□□ -0.08
SEC61A1P61619 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SEC61A1P61619 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SEC61A1P61619 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC14.57□□□□□ -0.08
SEC61A1P61619 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SEC61A1P61619 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SEC61A1P61619 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
SEC61A1P61619 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
SEC61A1P61619 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SEC61A1P61619 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms