Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLRN1P58418 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CLRN1P58418 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLRN1P58418 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLRN1P58418 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLRN1P58418 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.83□□□□□ -0.04
CLRN1P58418 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC14.83□□□□□ -0.04
CLRN1P58418 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CLRN1P58418 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLRN1P58418 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CLRN1P58418 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC14.83□□□□□ -0.04
CLRN1P58418 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.83□□□□□ -0.04
CLRN1P58418 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC14.83□□□□□ -0.04
CLRN1P58418 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLRN1P58418 MIR4515-201ENST00000584082 81 ntBASIC14.83□□□□□ -0.04
CLRN1P58418 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLRN1P58418 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.83□□□□□ -0.04
CLRN1P58418 Z83851.2-201ENST00000609564 659 ntBASIC14.83□□□□□ -0.04
CLRN1P58418 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC14.83□□□□□ -0.04
CLRN1P58418 ACTL9-202ENST00000612068 1252 ntBASIC14.83□□□□□ -0.04
CLRN1P58418 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CLRN1P58418 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CLRN1P58418 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLRN1P58418 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CLRN1P58418 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLRN1P58418 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CLRN1P58418 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CLRN1P58418 AL031731.1-201ENST00000642131 2094 ntBASIC14.83□□□□□ -0.04
CLRN1P58418 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLRN1P58418 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLRN1P58418 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLRN1P58418 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CLRN1P58418 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC14.83□□□□□ -0.04
CLRN1P58418 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLRN1P58418 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLRN1P58418 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLRN1P58418 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CLRN1P58418 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
CLRN1P58418 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLRN1P58418 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLRN1P58418 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.82□□□□□ -0.04
CLRN1P58418 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.82□□□□□ -0.04
CLRN1P58418 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLRN1P58418 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLRN1P58418 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLRN1P58418 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLRN1P58418 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLRN1P58418 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLRN1P58418 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC14.82□□□□□ -0.04
CLRN1P58418 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC14.82□□□□□ -0.04
CLRN1P58418 AL121894.2-201ENST00000602977 491 ntBASIC14.82□□□□□ -0.04
CLRN1P58418 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.82□□□□□ -0.04
CLRN1P58418 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.82□□□□□ -0.04
CLRN1P58418 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC14.82□□□□□ -0.04
CLRN1P58418 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC14.82□□□□□ -0.04
CLRN1P58418 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLRN1P58418 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.82□□□□□ -0.04
CLRN1P58418 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
CLRN1P58418 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CLRN1P58418 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.82□□□□□ -0.04
CLRN1P58418 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLRN1P58418 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CLRN1P58418 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLRN1P58418 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLRN1P58418 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
CLRN1P58418 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLRN1P58418 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLRN1P58418 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLRN1P58418 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CLRN1P58418 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLRN1P58418 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLRN1P58418 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC14.82□□□□□ -0.04
CLRN1P58418 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CLRN1P58418 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLRN1P58418 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
CLRN1P58418 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.81□□□□□ -0.04
CLRN1P58418 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14.81□□□□□ -0.04
CLRN1P58418 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLRN1P58418 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.81□□□□□ -0.04
CLRN1P58418 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLRN1P58418 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLRN1P58418 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLRN1P58418 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
CLRN1P58418 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLRN1P58418 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLRN1P58418 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CLRN1P58418 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CLRN1P58418 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.81□□□□□ -0.04
CLRN1P58418 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLRN1P58418 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLRN1P58418 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLRN1P58418 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CLRN1P58418 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.81□□□□□ -0.04
CLRN1P58418 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC14.81□□□□□ -0.04
CLRN1P58418 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.81□□□□□ -0.04
CLRN1P58418 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC14.81□□□□□ -0.04
CLRN1P58418 CD63-204ENST00000546939 779 ntTSL 3 BASIC14.81□□□□□ -0.04
CLRN1P58418 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC14.81□□□□□ -0.04
CLRN1P58418 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC14.81□□□□□ -0.04
CLRN1P58418 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms