Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.3■□□□□ 0.2
CLDN2P57739 RNA5SP410-201ENST00000516285 106 ntBASIC16.3■□□□□ 0.2
CLDN2P57739 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC16.3■□□□□ 0.2
CLDN2P57739 AP002490.2-201ENST00000524791 560 ntBASIC16.3■□□□□ 0.2
CLDN2P57739 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.3■□□□□ 0.2
CLDN2P57739 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC16.3■□□□□ 0.2
CLDN2P57739 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN2P57739 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN2P57739 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN2P57739 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN2P57739 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN2P57739 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN2P57739 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN2P57739 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN2P57739 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
CLDN2P57739 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN2P57739 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC16.29■□□□□ 0.2
CLDN2P57739 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN2P57739 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN2P57739 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.29■□□□□ 0.2
CLDN2P57739 AC100757.3-201ENST00000622361 1406 ntBASIC16.29■□□□□ 0.2
CLDN2P57739 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN2P57739 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN2P57739 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN2P57739 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN2P57739 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN2P57739 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN2P57739 MTND6P24-201ENST00000440466 518 ntBASIC16.29■□□□□ 0.2
CLDN2P57739 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN2P57739 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.29■□□□□ 0.2
CLDN2P57739 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN2P57739 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CLDN2P57739 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.29■□□□□ 0.2
CLDN2P57739 AC098859.1-201ENST00000502915 1238 ntBASIC16.29■□□□□ 0.2
CLDN2P57739 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.29■□□□□ 0.2
CLDN2P57739 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CLDN2P57739 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.29■□□□□ 0.2
CLDN2P57739 AL138828.2-201ENST00000615812 383 ntBASIC16.29■□□□□ 0.2
CLDN2P57739 AL590560.3-201ENST00000623350 461 ntBASIC16.29■□□□□ 0.2
CLDN2P57739 AL139011.1-202ENST00000642063 584 ntBASIC16.29■□□□□ 0.2
CLDN2P57739 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN2P57739 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN2P57739 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN2P57739 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN2P57739 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN2P57739 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CLDN2P57739 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN2P57739 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN2P57739 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.29■□□□□ 0.2
CLDN2P57739 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN2P57739 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CLDN2P57739 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLDN2P57739 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
CLDN2P57739 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
CLDN2P57739 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN2P57739 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN2P57739 AL031731.1-201ENST00000642131 2094 ntBASIC16.28■□□□□ 0.2
CLDN2P57739 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.28■□□□□ 0.2
CLDN2P57739 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.28■□□□□ 0.2
CLDN2P57739 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN2P57739 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN2P57739 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.28■□□□□ 0.2
CLDN2P57739 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CLDN2P57739 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
CLDN2P57739 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN2P57739 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.28■□□□□ 0.2
CLDN2P57739 PCDHA12-202ENST00000613593 2588 ntBASIC16.28■□□□□ 0.2
CLDN2P57739 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN2P57739 FAM220BP-201ENST00000377689 816 ntBASIC16.28■□□□□ 0.2
CLDN2P57739 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.28■□□□□ 0.2
CLDN2P57739 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.28■□□□□ 0.2
CLDN2P57739 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.28■□□□□ 0.2
CLDN2P57739 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC16.28■□□□□ 0.2
CLDN2P57739 AC004890.2-204ENST00000481968 304 ntBASIC16.28■□□□□ 0.2
CLDN2P57739 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.28■□□□□ 0.2
CLDN2P57739 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CLDN2P57739 TERF1P3-201ENST00000505638 1227 ntBASIC16.28■□□□□ 0.2
CLDN2P57739 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.28■□□□□ 0.2
CLDN2P57739 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.28■□□□□ 0.2
CLDN2P57739 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.28■□□□□ 0.2
CLDN2P57739 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.28■□□□□ 0.2
CLDN2P57739 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.28■□□□□ 0.2
CLDN2P57739 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.28■□□□□ 0.2
CLDN2P57739 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.28■□□□□ 0.2
CLDN2P57739 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN2P57739 LINC02560-201ENST00000596379 459 ntBASIC16.28■□□□□ 0.2
CLDN2P57739 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN2P57739 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN2P57739 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
CLDN2P57739 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN2P57739 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN2P57739 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN2P57739 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN2P57739 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN2P57739 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.28■□□□□ 0.2
CLDN2P57739 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.28■□□□□ 0.2
CLDN2P57739 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN2P57739 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.28■□□□□ 0.2
CLDN2P57739 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.28■□□□□ 0.2
CLDN2P57739 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms