Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC14.5□□□□□ -0.09
FOXG1P55316 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
FOXG1P55316 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
FOXG1P55316 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
FOXG1P55316 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
FOXG1P55316 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC14.5□□□□□ -0.09
FOXG1P55316 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
FOXG1P55316 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
FOXG1P55316 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
FOXG1P55316 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.49□□□□□ -0.09
FOXG1P55316 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
FOXG1P55316 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
FOXG1P55316 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
FOXG1P55316 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.49□□□□□ -0.09
FOXG1P55316 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
FOXG1P55316 KRT18P28-201ENST00000453838 1332 ntBASIC14.49□□□□□ -0.09
FOXG1P55316 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
FOXG1P55316 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
FOXG1P55316 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
FOXG1P55316 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
FOXG1P55316 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
FOXG1P55316 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
FOXG1P55316 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
FOXG1P55316 MIR346-201ENST00000362234 95 ntBASIC14.49□□□□□ -0.09
FOXG1P55316 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.49□□□□□ -0.09
FOXG1P55316 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.49□□□□□ -0.09
FOXG1P55316 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.49□□□□□ -0.09
FOXG1P55316 TSEN15P1-201ENST00000423257 515 ntBASIC14.49□□□□□ -0.09
FOXG1P55316 GPS2P2-201ENST00000430745 888 ntBASIC14.49□□□□□ -0.09
FOXG1P55316 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.49□□□□□ -0.09
FOXG1P55316 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.49□□□□□ -0.09
FOXG1P55316 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.49□□□□□ -0.09
FOXG1P55316 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC14.49□□□□□ -0.09
FOXG1P55316 PRYP6-201ENST00000514804 343 ntBASIC14.49□□□□□ -0.09
FOXG1P55316 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
FOXG1P55316 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC14.49□□□□□ -0.09
FOXG1P55316 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.49□□□□□ -0.09
FOXG1P55316 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
FOXG1P55316 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
FOXG1P55316 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
FOXG1P55316 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
FOXG1P55316 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
FOXG1P55316 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
FOXG1P55316 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
FOXG1P55316 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
FOXG1P55316 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
FOXG1P55316 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
FOXG1P55316 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
FOXG1P55316 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.49□□□□□ -0.09
FOXG1P55316 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
FOXG1P55316 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC14.49□□□□□ -0.09
FOXG1P55316 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
FOXG1P55316 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
FOXG1P55316 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
FOXG1P55316 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
FOXG1P55316 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
FOXG1P55316 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.48□□□□□ -0.09
FOXG1P55316 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
FOXG1P55316 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
FOXG1P55316 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
FOXG1P55316 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
FOXG1P55316 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC14.48□□□□□ -0.09
FOXG1P55316 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
FOXG1P55316 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC14.48□□□□□ -0.09
FOXG1P55316 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
FOXG1P55316 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
FOXG1P55316 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
FOXG1P55316 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
FOXG1P55316 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.48□□□□□ -0.09
FOXG1P55316 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.48□□□□□ -0.09
FOXG1P55316 AC092364.2-201ENST00000596710 2692 ntBASIC14.48□□□□□ -0.09
FOXG1P55316 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
FOXG1P55316 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
FOXG1P55316 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
FOXG1P55316 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
FOXG1P55316 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.48□□□□□ -0.09
FOXG1P55316 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
FOXG1P55316 GGCT-205ENST00000409436 954 ntTSL 3 BASIC14.48□□□□□ -0.09
FOXG1P55316 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.48□□□□□ -0.09
FOXG1P55316 KRT18P32-201ENST00000424695 1287 ntBASIC14.48□□□□□ -0.09
FOXG1P55316 AC142381.1-201ENST00000426099 345 ntBASIC14.48□□□□□ -0.09
FOXG1P55316 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
FOXG1P55316 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.48□□□□□ -0.09
FOXG1P55316 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
FOXG1P55316 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC14.48□□□□□ -0.09
FOXG1P55316 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.48□□□□□ -0.09
FOXG1P55316 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.48□□□□□ -0.09
FOXG1P55316 AC009093.7-201ENST00000623853 1223 ntBASIC14.48□□□□□ -0.09
FOXG1P55316 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
FOXG1P55316 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
FOXG1P55316 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
FOXG1P55316 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
FOXG1P55316 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.48□□□□□ -0.09
FOXG1P55316 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC14.48□□□□□ -0.09
FOXG1P55316 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
FOXG1P55316 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
FOXG1P55316 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
FOXG1P55316 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.48□□□□□ -0.09
FOXG1P55316 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.48□□□□□ -0.09
FOXG1P55316 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms