Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.89■□□□□ 0.3
CDH4P55283 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
CDH4P55283 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CDH4P55283 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH4P55283 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH4P55283 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDH4P55283 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH4P55283 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CDH4P55283 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH4P55283 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH4P55283 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.89■□□□□ 0.29
CDH4P55283 AL139400.1-201ENST00000366220 510 ntBASIC16.89■□□□□ 0.29
CDH4P55283 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.89■□□□□ 0.29
CDH4P55283 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.89■□□□□ 0.29
CDH4P55283 GPS2P2-201ENST00000430745 888 ntBASIC16.89■□□□□ 0.29
CDH4P55283 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDH4P55283 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.89■□□□□ 0.29
CDH4P55283 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.89■□□□□ 0.29
CDH4P55283 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.89■□□□□ 0.29
CDH4P55283 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.89■□□□□ 0.29
CDH4P55283 SPTSSB-204ENST00000617024 1292 ntBASIC16.89■□□□□ 0.29
CDH4P55283 LINC00628-201ENST00000628516 1289 ntBASIC16.89■□□□□ 0.29
CDH4P55283 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.89■□□□□ 0.29
CDH4P55283 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH4P55283 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH4P55283 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH4P55283 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.89■□□□□ 0.29
CDH4P55283 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.89■□□□□ 0.29
CDH4P55283 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CDH4P55283 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CDH4P55283 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.89■□□□□ 0.29
CDH4P55283 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CDH4P55283 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH4P55283 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.89■□□□□ 0.29
CDH4P55283 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDH4P55283 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDH4P55283 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDH4P55283 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.88■□□□□ 0.29
CDH4P55283 AC092171.3-201ENST00000610122 2651 ntBASIC16.88■□□□□ 0.29
CDH4P55283 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.88■□□□□ 0.29
CDH4P55283 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CDH4P55283 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.88■□□□□ 0.29
CDH4P55283 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH4P55283 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH4P55283 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH4P55283 FOXO1B-201ENST00000504678 1527 ntBASIC16.88■□□□□ 0.29
CDH4P55283 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH4P55283 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDH4P55283 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH4P55283 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.88■□□□□ 0.29
CDH4P55283 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH4P55283 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.88■□□□□ 0.29
CDH4P55283 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.88■□□□□ 0.29
CDH4P55283 RBPMS2P1-201ENST00000437762 623 ntBASIC16.88■□□□□ 0.29
CDH4P55283 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.88■□□□□ 0.29
CDH4P55283 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDH4P55283 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH4P55283 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDH4P55283 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CDH4P55283 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.88■□□□□ 0.29
CDH4P55283 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.88■□□□□ 0.29
CDH4P55283 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.88■□□□□ 0.29
CDH4P55283 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.88■□□□□ 0.29
CDH4P55283 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CDH4P55283 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.88■□□□□ 0.29
CDH4P55283 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH4P55283 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CDH4P55283 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH4P55283 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.88■□□□□ 0.29
CDH4P55283 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDH4P55283 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDH4P55283 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDH4P55283 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.88■□□□□ 0.29
CDH4P55283 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CDH4P55283 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.87■□□□□ 0.29
CDH4P55283 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CDH4P55283 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH4P55283 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH4P55283 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CDH4P55283 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH4P55283 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH4P55283 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.87■□□□□ 0.29
CDH4P55283 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDH4P55283 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH4P55283 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH4P55283 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH4P55283 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDH4P55283 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH4P55283 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH4P55283 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH4P55283 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
CDH4P55283 POU5F1P6-201ENST00000466990 990 ntBASIC16.87■□□□□ 0.29
CDH4P55283 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.87■□□□□ 0.29
CDH4P55283 AC098859.1-201ENST00000502915 1238 ntBASIC16.87■□□□□ 0.29
CDH4P55283 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.87■□□□□ 0.29
CDH4P55283 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
CDH4P55283 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.87■□□□□ 0.29
CDH4P55283 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CDH4P55283 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.87■□□□□ 0.29
CDH4P55283 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms