Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CLTCL1P53675 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
CLTCL1P53675 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
CLTCL1P53675 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC23.3■■□□□ 1.32
CLTCL1P53675 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC23.3■■□□□ 1.32
CLTCL1P53675 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CLTCL1P53675 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
CLTCL1P53675 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CLTCL1P53675 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CLTCL1P53675 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CLTCL1P53675 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC23.3■■□□□ 1.32
CLTCL1P53675 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CLTCL1P53675 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CLTCL1P53675 AC074338.1-201ENST00000416825 156 ntBASIC23.3■■□□□ 1.32
CLTCL1P53675 HLA-V-201ENST00000429037 534 ntBASIC23.3■■□□□ 1.32
CLTCL1P53675 RN7SL752P-201ENST00000463779 287 ntBASIC23.3■■□□□ 1.32
CLTCL1P53675 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC23.29■■□□□ 1.32
CLTCL1P53675 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CLTCL1P53675 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
CLTCL1P53675 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
CLTCL1P53675 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC23.29■■□□□ 1.32
CLTCL1P53675 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CLTCL1P53675 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CLTCL1P53675 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CLTCL1P53675 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC23.29■■□□□ 1.32
CLTCL1P53675 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CLTCL1P53675 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
CLTCL1P53675 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC23.29■■□□□ 1.32
CLTCL1P53675 GRN-214ENST00000589265 1632 ntTSL 5 BASIC23.29■■□□□ 1.32
CLTCL1P53675 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
CLTCL1P53675 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CLTCL1P53675 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC23.29■■□□□ 1.32
CLTCL1P53675 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
CLTCL1P53675 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CLTCL1P53675 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC23.29■■□□□ 1.32
CLTCL1P53675 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC23.29■■□□□ 1.32
CLTCL1P53675 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC23.29■■□□□ 1.32
CLTCL1P53675 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC23.29■■□□□ 1.32
CLTCL1P53675 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
CLTCL1P53675 FUZ-207ENST00000526575 482 ntTSL 4 BASIC23.29■■□□□ 1.32
CLTCL1P53675 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC23.29■■□□□ 1.32
CLTCL1P53675 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CLTCL1P53675 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CLTCL1P53675 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CLTCL1P53675 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CLTCL1P53675 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CLTCL1P53675 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC23.28■■□□□ 1.32
CLTCL1P53675 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CLTCL1P53675 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CLTCL1P53675 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
CLTCL1P53675 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC23.28■■□□□ 1.32
CLTCL1P53675 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC23.28■■□□□ 1.32
CLTCL1P53675 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC23.28■■□□□ 1.32
CLTCL1P53675 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CLTCL1P53675 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
CLTCL1P53675 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC23.28■■□□□ 1.32
CLTCL1P53675 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC23.28■■□□□ 1.32
CLTCL1P53675 AC106886.1-201ENST00000568660 600 ntBASIC23.28■■□□□ 1.32
CLTCL1P53675 AC017083.2-201ENST00000608069 979 ntBASIC23.28■■□□□ 1.32
CLTCL1P53675 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CLTCL1P53675 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CLTCL1P53675 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CLTCL1P53675 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC23.27■■□□□ 1.32
CLTCL1P53675 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC23.27■■□□□ 1.32
CLTCL1P53675 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
CLTCL1P53675 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CLTCL1P53675 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.32
CLTCL1P53675 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC23.27■■□□□ 1.32
CLTCL1P53675 AL162274.1-201ENST00000617191 1098 ntBASIC23.27■■□□□ 1.32
CLTCL1P53675 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC23.27■■□□□ 1.32
CLTCL1P53675 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC23.27■■□□□ 1.32
CLTCL1P53675 CLK3P2-201ENST00000427566 1453 ntBASIC23.27■■□□□ 1.32
CLTCL1P53675 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
CLTCL1P53675 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CLTCL1P53675 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC23.27■■□□□ 1.32
CLTCL1P53675 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CLTCL1P53675 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC23.27■■□□□ 1.32
CLTCL1P53675 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
CLTCL1P53675 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC23.27■■□□□ 1.32
CLTCL1P53675 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC23.27■■□□□ 1.31
CLTCL1P53675 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.31
CLTCL1P53675 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CLTCL1P53675 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
CLTCL1P53675 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC23.26■■□□□ 1.31
CLTCL1P53675 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC23.26■■□□□ 1.31
CLTCL1P53675 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC23.26■■□□□ 1.31
CLTCL1P53675 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
CLTCL1P53675 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CLTCL1P53675 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CLTCL1P53675 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC23.26■■□□□ 1.31
CLTCL1P53675 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC23.26■■□□□ 1.31
CLTCL1P53675 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC23.26■■□□□ 1.31
CLTCL1P53675 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC23.26■■□□□ 1.31
CLTCL1P53675 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CLTCL1P53675 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC23.26■■□□□ 1.31
CLTCL1P53675 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC23.26■■□□□ 1.31
CLTCL1P53675 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC23.26■■□□□ 1.31
CLTCL1P53675 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
CLTCL1P53675 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
CLTCL1P53675 ANKRD19P-201ENST00000338192 862 ntBASIC23.26■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms