Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AC097493.3-201ENST00000509725 367 ntBASIC16.08■□□□□ 0.16
PDX1P52945 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.08■□□□□ 0.16
PDX1P52945 AC027307.2-201ENST00000591252 911 ntBASIC16.08■□□□□ 0.16
PDX1P52945 LINC02560-201ENST00000596379 459 ntBASIC16.08■□□□□ 0.16
PDX1P52945 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.08■□□□□ 0.16
PDX1P52945 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
PDX1P52945 AC008761.3-201ENST00000624803 892 ntBASIC16.08■□□□□ 0.16
PDX1P52945 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PDX1P52945 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PDX1P52945 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.08■□□□□ 0.16
PDX1P52945 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PDX1P52945 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.08■□□□□ 0.16
PDX1P52945 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
PDX1P52945 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
PDX1P52945 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
PDX1P52945 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
PDX1P52945 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PDX1P52945 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PDX1P52945 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PDX1P52945 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
PDX1P52945 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PDX1P52945 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
PDX1P52945 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDX1P52945 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.07■□□□□ 0.16
PDX1P52945 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDX1P52945 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
PDX1P52945 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PDX1P52945 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
PDX1P52945 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.07■□□□□ 0.16
PDX1P52945 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDX1P52945 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDX1P52945 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PDX1P52945 AC011676.5-201ENST00000624864 2660 ntBASIC16.07■□□□□ 0.16
PDX1P52945 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDX1P52945 AC099398.1-201ENST00000567919 2776 ntBASIC16.07■□□□□ 0.16
PDX1P52945 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PDX1P52945 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDX1P52945 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.07■□□□□ 0.16
PDX1P52945 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDX1P52945 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.07■□□□□ 0.16
PDX1P52945 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDX1P52945 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.07■□□□□ 0.16
PDX1P52945 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
PDX1P52945 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.07■□□□□ 0.16
PDX1P52945 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.07■□□□□ 0.16
PDX1P52945 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.07■□□□□ 0.16
PDX1P52945 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.07■□□□□ 0.16
PDX1P52945 AC069120.2-201ENST00000524091 540 ntBASIC16.07■□□□□ 0.16
PDX1P52945 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.07■□□□□ 0.16
PDX1P52945 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PDX1P52945 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.07■□□□□ 0.16
PDX1P52945 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PDX1P52945 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDX1P52945 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.07■□□□□ 0.16
PDX1P52945 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDX1P52945 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDX1P52945 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.07■□□□□ 0.16
PDX1P52945 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDX1P52945 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDX1P52945 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.07■□□□□ 0.16
PDX1P52945 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
PDX1P52945 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PDX1P52945 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.07■□□□□ 0.16
PDX1P52945 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
PDX1P52945 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.06■□□□□ 0.16
PDX1P52945 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.06■□□□□ 0.16
PDX1P52945 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.06■□□□□ 0.16
PDX1P52945 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDX1P52945 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
PDX1P52945 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDX1P52945 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDX1P52945 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.06■□□□□ 0.16
PDX1P52945 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PDX1P52945 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDX1P52945 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PDX1P52945 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PDX1P52945 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.06■□□□□ 0.16
PDX1P52945 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.06■□□□□ 0.16
PDX1P52945 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.06■□□□□ 0.16
PDX1P52945 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.06■□□□□ 0.16
PDX1P52945 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.06■□□□□ 0.16
PDX1P52945 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.06■□□□□ 0.16
PDX1P52945 AC244107.1-201ENST00000442033 332 ntBASIC16.06■□□□□ 0.16
PDX1P52945 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.06■□□□□ 0.16
PDX1P52945 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
PDX1P52945 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.06■□□□□ 0.16
PDX1P52945 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDX1P52945 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
PDX1P52945 AC005225.4-201ENST00000557330 545 ntBASIC16.06■□□□□ 0.16
PDX1P52945 AL138918.1-201ENST00000568306 659 ntBASIC16.06■□□□□ 0.16
PDX1P52945 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.06■□□□□ 0.16
PDX1P52945 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.06■□□□□ 0.16
PDX1P52945 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PDX1P52945 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.06■□□□□ 0.16
PDX1P52945 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDX1P52945 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDX1P52945 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDX1P52945 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDX1P52945 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDX1P52945 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms