Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CENPFP49454 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CENPFP49454 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CENPFP49454 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC18.39■□□□□ 0.53
CENPFP49454 AC092978.1-202ENST00000637590 1327 ntBASIC18.39■□□□□ 0.53
CENPFP49454 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CENPFP49454 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.39■□□□□ 0.53
CENPFP49454 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.39■□□□□ 0.53
CENPFP49454 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC18.39■□□□□ 0.53
CENPFP49454 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CENPFP49454 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.39■□□□□ 0.53
CENPFP49454 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
CENPFP49454 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CENPFP49454 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CENPFP49454 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CENPFP49454 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CENPFP49454 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
CENPFP49454 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC18.39■□□□□ 0.53
CENPFP49454 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.39■□□□□ 0.53
CENPFP49454 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.39■□□□□ 0.53
CENPFP49454 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CENPFP49454 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CENPFP49454 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CENPFP49454 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CENPFP49454 BOLA2P3-201ENST00000404566 256 ntBASIC18.38■□□□□ 0.53
CENPFP49454 KRT43P-201ENST00000434019 910 ntBASIC18.38■□□□□ 0.53
CENPFP49454 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CENPFP49454 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.38■□□□□ 0.53
CENPFP49454 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CENPFP49454 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CENPFP49454 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC18.38■□□□□ 0.53
CENPFP49454 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CENPFP49454 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC18.38■□□□□ 0.53
CENPFP49454 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CENPFP49454 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CENPFP49454 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CENPFP49454 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC18.38■□□□□ 0.53
CENPFP49454 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.38■□□□□ 0.53
CENPFP49454 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CENPFP49454 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CENPFP49454 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC18.38■□□□□ 0.53
CENPFP49454 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
CENPFP49454 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CENPFP49454 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC18.38■□□□□ 0.53
CENPFP49454 SDHAP3-202ENST00000515467 728 ntBASIC18.38■□□□□ 0.53
CENPFP49454 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CENPFP49454 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CENPFP49454 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CENPFP49454 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CENPFP49454 GGCT-203ENST00000409144 836 ntTSL 2 BASIC18.37■□□□□ 0.53
CENPFP49454 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC18.37■□□□□ 0.53
CENPFP49454 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CENPFP49454 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
CENPFP49454 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC18.37■□□□□ 0.53
CENPFP49454 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CENPFP49454 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC18.37■□□□□ 0.53
CENPFP49454 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CENPFP49454 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC18.37■□□□□ 0.53
CENPFP49454 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CENPFP49454 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CENPFP49454 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CENPFP49454 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
CENPFP49454 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CENPFP49454 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CENPFP49454 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
CENPFP49454 BTBD6P1-201ENST00000412176 1267 ntBASIC18.37■□□□□ 0.53
CENPFP49454 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC18.37■□□□□ 0.53
CENPFP49454 NAA38-207ENST00000576861 556 ntTSL 3 BASIC18.37■□□□□ 0.53
CENPFP49454 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CENPFP49454 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CENPFP49454 AC092171.3-201ENST00000610122 2651 ntBASIC18.37■□□□□ 0.53
CENPFP49454 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CENPFP49454 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC18.36■□□□□ 0.53
CENPFP49454 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CENPFP49454 AC005695.3-201ENST00000614522 232 ntBASIC18.36■□□□□ 0.53
CENPFP49454 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
CENPFP49454 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CENPFP49454 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC18.36■□□□□ 0.53
CENPFP49454 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC18.36■□□□□ 0.53
CENPFP49454 FTH1P14-201ENST00000482930 551 ntBASIC18.36■□□□□ 0.53
CENPFP49454 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CENPFP49454 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC18.36■□□□□ 0.53
CENPFP49454 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC18.36■□□□□ 0.53
CENPFP49454 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC18.36■□□□□ 0.53
CENPFP49454 AP001350.2-201ENST00000625104 1094 ntBASIC18.36■□□□□ 0.53
CENPFP49454 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC18.36■□□□□ 0.53
CENPFP49454 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CENPFP49454 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CENPFP49454 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CENPFP49454 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CENPFP49454 RELA-227ENST00000615805 2236 ntTSL 5 BASIC18.36■□□□□ 0.53
CENPFP49454 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC18.36■□□□□ 0.53
CENPFP49454 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CENPFP49454 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC18.36■□□□□ 0.53
CENPFP49454 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC18.36■□□□□ 0.53
CENPFP49454 AC026954.1-201ENST00000429771 1293 ntBASIC18.36■□□□□ 0.53
CENPFP49454 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC18.36■□□□□ 0.53
CENPFP49454 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC18.36■□□□□ 0.53
CENPFP49454 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC18.36■□□□□ 0.53
CENPFP49454 PIGL-212ENST00000581006 554 ntTSL 4 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms