Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
CX3CR1P49238 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC14.61□□□□□ -0.07
CX3CR1P49238 INIP-202ENST00000374236 874 ntTSL 2 BASIC14.61□□□□□ -0.07
CX3CR1P49238 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
CX3CR1P49238 FAM197Y8-203ENST00000450145 560 ntBASIC14.61□□□□□ -0.07
CX3CR1P49238 EMBP1-201ENST00000458200 901 ntBASIC14.61□□□□□ -0.07
CX3CR1P49238 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CX3CR1P49238 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC14.61□□□□□ -0.07
CX3CR1P49238 AC107918.2-201ENST00000530817 355 ntBASIC14.61□□□□□ -0.07
CX3CR1P49238 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CX3CR1P49238 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC14.61□□□□□ -0.07
CX3CR1P49238 ETFA-208ENST00000559602 792 ntTSL 3 BASIC14.61□□□□□ -0.07
CX3CR1P49238 AC008735.5-201ENST00000623544 497 ntBASIC14.61□□□□□ -0.07
CX3CR1P49238 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC14.61□□□□□ -0.07
CX3CR1P49238 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC14.61□□□□□ -0.07
CX3CR1P49238 AP001350.2-201ENST00000625104 1094 ntBASIC14.61□□□□□ -0.07
CX3CR1P49238 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CX3CR1P49238 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CX3CR1P49238 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CX3CR1P49238 SLC22A20-204ENST00000530038 1673 ntBASIC14.61□□□□□ -0.07
CX3CR1P49238 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
CX3CR1P49238 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
CX3CR1P49238 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.61□□□□□ -0.07
CX3CR1P49238 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CX3CR1P49238 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CX3CR1P49238 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CX3CR1P49238 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
CX3CR1P49238 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CX3CR1P49238 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CX3CR1P49238 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.6□□□□□ -0.07
CX3CR1P49238 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CX3CR1P49238 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC14.6□□□□□ -0.07
CX3CR1P49238 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CX3CR1P49238 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CX3CR1P49238 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CX3CR1P49238 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CX3CR1P49238 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CX3CR1P49238 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CX3CR1P49238 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CX3CR1P49238 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.6□□□□□ -0.07
CX3CR1P49238 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC14.6□□□□□ -0.07
CX3CR1P49238 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CX3CR1P49238 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC14.6□□□□□ -0.07
CX3CR1P49238 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CX3CR1P49238 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CX3CR1P49238 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC14.6□□□□□ -0.07
CX3CR1P49238 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC14.6□□□□□ -0.07
CX3CR1P49238 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC14.6□□□□□ -0.07
CX3CR1P49238 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.6□□□□□ -0.07
CX3CR1P49238 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC14.6□□□□□ -0.07
CX3CR1P49238 AF186996.4-201ENST00000467186 377 ntBASIC14.6□□□□□ -0.07
CX3CR1P49238 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC14.6□□□□□ -0.07
CX3CR1P49238 AC005412.3-201ENST00000580309 715 ntBASIC14.6□□□□□ -0.07
CX3CR1P49238 CYP2A7P1-201ENST00000595391 815 ntBASIC14.6□□□□□ -0.07
CX3CR1P49238 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CX3CR1P49238 AL356488.2-201ENST00000602755 427 ntBASIC14.6□□□□□ -0.07
CX3CR1P49238 AL121912.1-201ENST00000603683 238 ntBASIC14.6□□□□□ -0.07
CX3CR1P49238 AC008667.4-201ENST00000607370 168 ntBASIC14.6□□□□□ -0.07
CX3CR1P49238 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.6□□□□□ -0.07
CX3CR1P49238 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CX3CR1P49238 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC14.6□□□□□ -0.07
CX3CR1P49238 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
CX3CR1P49238 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CX3CR1P49238 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.6□□□□□ -0.07
CX3CR1P49238 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CX3CR1P49238 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CX3CR1P49238 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC14.6□□□□□ -0.07
CX3CR1P49238 AC129492.6-201ENST00000611383 1305 ntBASIC14.6□□□□□ -0.07
CX3CR1P49238 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.6□□□□□ -0.07
CX3CR1P49238 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CX3CR1P49238 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.07
CX3CR1P49238 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC14.6□□□□□ -0.07
CX3CR1P49238 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.6□□□□□ -0.07
CX3CR1P49238 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CX3CR1P49238 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CX3CR1P49238 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CX3CR1P49238 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CX3CR1P49238 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CX3CR1P49238 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CX3CR1P49238 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CX3CR1P49238 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CX3CR1P49238 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
CX3CR1P49238 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CX3CR1P49238 AL031731.1-201ENST00000642131 2094 ntBASIC14.59□□□□□ -0.07
CX3CR1P49238 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CX3CR1P49238 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CX3CR1P49238 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.59□□□□□ -0.07
CX3CR1P49238 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.59□□□□□ -0.07
CX3CR1P49238 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CX3CR1P49238 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CX3CR1P49238 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CX3CR1P49238 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CX3CR1P49238 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CX3CR1P49238 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CX3CR1P49238 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.59□□□□□ -0.07
CX3CR1P49238 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC14.59□□□□□ -0.07
CX3CR1P49238 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC14.59□□□□□ -0.07
CX3CR1P49238 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC14.59□□□□□ -0.07
CX3CR1P49238 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC14.59□□□□□ -0.07
CX3CR1P49238 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms