Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HOXC8P31273 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
HOXC8P31273 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
HOXC8P31273 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
HOXC8P31273 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC17.84■□□□□ 0.45
HOXC8P31273 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HOXC8P31273 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HOXC8P31273 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
HOXC8P31273 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HOXC8P31273 AC098850.1-201ENST00000419919 790 ntBASIC17.84■□□□□ 0.45
HOXC8P31273 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC17.84■□□□□ 0.45
HOXC8P31273 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC17.84■□□□□ 0.45
HOXC8P31273 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC17.84■□□□□ 0.45
HOXC8P31273 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.84■□□□□ 0.45
HOXC8P31273 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC17.84■□□□□ 0.45
HOXC8P31273 GLI4-203ENST00000517468 963 ntTSL 5 BASIC17.84■□□□□ 0.45
HOXC8P31273 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC17.84■□□□□ 0.45
HOXC8P31273 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC17.84■□□□□ 0.45
HOXC8P31273 RRP7BP-205ENST00000566851 833 ntBASIC17.84■□□□□ 0.45
HOXC8P31273 AC132938.2-201ENST00000579188 680 ntBASIC17.84■□□□□ 0.45
HOXC8P31273 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC17.84■□□□□ 0.45
HOXC8P31273 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC17.84■□□□□ 0.45
HOXC8P31273 AL162274.1-201ENST00000617191 1098 ntBASIC17.84■□□□□ 0.45
HOXC8P31273 MIR6752-201ENST00000618442 71 ntBASIC17.84■□□□□ 0.45
HOXC8P31273 AL591163.1-201ENST00000641757 987 ntBASIC17.84■□□□□ 0.45
HOXC8P31273 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
HOXC8P31273 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HOXC8P31273 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17.84■□□□□ 0.45
HOXC8P31273 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HOXC8P31273 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
HOXC8P31273 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HOXC8P31273 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HOXC8P31273 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HOXC8P31273 Z97205.2-201ENST00000564697 1639 ntBASIC17.83■□□□□ 0.45
HOXC8P31273 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
HOXC8P31273 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
HOXC8P31273 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.83■□□□□ 0.45
HOXC8P31273 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC17.83■□□□□ 0.45
HOXC8P31273 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
HOXC8P31273 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
HOXC8P31273 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.83■□□□□ 0.44
HOXC8P31273 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HOXC8P31273 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HOXC8P31273 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HOXC8P31273 ATP5G2P4-201ENST00000442175 420 ntBASIC17.83■□□□□ 0.44
HOXC8P31273 GPR53P-205ENST00000457298 1084 ntBASIC17.83■□□□□ 0.44
HOXC8P31273 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC17.83■□□□□ 0.44
HOXC8P31273 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC17.83■□□□□ 0.44
HOXC8P31273 CTBP2P3-201ENST00000585629 1255 ntBASIC17.83■□□□□ 0.44
HOXC8P31273 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
HOXC8P31273 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
HOXC8P31273 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC17.83■□□□□ 0.44
HOXC8P31273 AL391069.4-201ENST00000609583 481 ntBASIC17.83■□□□□ 0.44
HOXC8P31273 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HOXC8P31273 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC17.83■□□□□ 0.44
HOXC8P31273 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.83■□□□□ 0.44
HOXC8P31273 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.83■□□□□ 0.44
HOXC8P31273 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HOXC8P31273 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
HOXC8P31273 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HOXC8P31273 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HOXC8P31273 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
HOXC8P31273 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HOXC8P31273 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.82■□□□□ 0.44
HOXC8P31273 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
HOXC8P31273 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
HOXC8P31273 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HOXC8P31273 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HOXC8P31273 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
HOXC8P31273 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.82■□□□□ 0.44
HOXC8P31273 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HOXC8P31273 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HOXC8P31273 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HOXC8P31273 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HOXC8P31273 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HOXC8P31273 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HOXC8P31273 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC17.82■□□□□ 0.44
HOXC8P31273 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HOXC8P31273 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC17.82■□□□□ 0.44
HOXC8P31273 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC17.82■□□□□ 0.44
HOXC8P31273 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC17.82■□□□□ 0.44
HOXC8P31273 PGF-202ENST00000405431 666 ntTSL 5 BASIC17.82■□□□□ 0.44
HOXC8P31273 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC17.82■□□□□ 0.44
HOXC8P31273 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HOXC8P31273 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC17.82■□□□□ 0.44
HOXC8P31273 SUOX-214ENST00000551841 906 ntTSL 3 BASIC17.82■□□□□ 0.44
HOXC8P31273 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC17.82■□□□□ 0.44
HOXC8P31273 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC17.82■□□□□ 0.44
HOXC8P31273 AC093726.1-201ENST00000608064 963 ntBASIC17.82■□□□□ 0.44
HOXC8P31273 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.82■□□□□ 0.44
HOXC8P31273 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HOXC8P31273 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
HOXC8P31273 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
HOXC8P31273 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC17.82■□□□□ 0.44
HOXC8P31273 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HOXC8P31273 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HOXC8P31273 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
HOXC8P31273 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HOXC8P31273 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.81■□□□□ 0.44
HOXC8P31273 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms