Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PTPN6P29350 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PTPN6P29350 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
PTPN6P29350 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PTPN6P29350 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.75■□□□□ 0.11
PTPN6P29350 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
PTPN6P29350 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
PTPN6P29350 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
PTPN6P29350 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PTPN6P29350 AC010491.1-201ENST00000563101 2797 ntBASIC15.75■□□□□ 0.11
PTPN6P29350 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PTPN6P29350 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PTPN6P29350 ELK2BP-201ENST00000415014 1224 ntBASIC15.75■□□□□ 0.11
PTPN6P29350 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.75■□□□□ 0.11
PTPN6P29350 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PTPN6P29350 AC136632.2-201ENST00000512891 861 ntBASIC15.75■□□□□ 0.11
PTPN6P29350 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PTPN6P29350 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.75■□□□□ 0.11
PTPN6P29350 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PTPN6P29350 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PTPN6P29350 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
PTPN6P29350 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.75■□□□□ 0.11
PTPN6P29350 AC117500.6-201ENST00000624871 588 ntBASIC15.75■□□□□ 0.11
PTPN6P29350 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PTPN6P29350 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PTPN6P29350 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
PTPN6P29350 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
PTPN6P29350 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PTPN6P29350 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.75■□□□□ 0.11
PTPN6P29350 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.75■□□□□ 0.11
PTPN6P29350 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PTPN6P29350 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.75■□□□□ 0.11
PTPN6P29350 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
PTPN6P29350 GPAA1P2-202ENST00000606848 1787 ntBASIC15.75■□□□□ 0.11
PTPN6P29350 AC006504.4-201ENST00000592118 1568 ntBASIC15.75■□□□□ 0.11
PTPN6P29350 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PTPN6P29350 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.74■□□□□ 0.11
PTPN6P29350 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PTPN6P29350 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PTPN6P29350 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PTPN6P29350 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PTPN6P29350 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
PTPN6P29350 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
PTPN6P29350 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
PTPN6P29350 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
PTPN6P29350 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
PTPN6P29350 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.74■□□□□ 0.11
PTPN6P29350 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PTPN6P29350 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.74■□□□□ 0.11
PTPN6P29350 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PTPN6P29350 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
PTPN6P29350 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PTPN6P29350 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
PTPN6P29350 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PTPN6P29350 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PTPN6P29350 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PTPN6P29350 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PTPN6P29350 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.74■□□□□ 0.11
PTPN6P29350 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.74■□□□□ 0.11
PTPN6P29350 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
PTPN6P29350 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
PTPN6P29350 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
PTPN6P29350 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
PTPN6P29350 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.74■□□□□ 0.11
PTPN6P29350 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.74■□□□□ 0.11
PTPN6P29350 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.74■□□□□ 0.11
PTPN6P29350 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
PTPN6P29350 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC15.74■□□□□ 0.11
PTPN6P29350 RPL13AP23-201ENST00000480739 586 ntBASIC15.74■□□□□ 0.11
PTPN6P29350 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PTPN6P29350 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.74■□□□□ 0.11
PTPN6P29350 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.74■□□□□ 0.11
PTPN6P29350 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.74■□□□□ 0.11
PTPN6P29350 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC15.74■□□□□ 0.11
PTPN6P29350 CYP2A7P1-201ENST00000595391 815 ntBASIC15.74■□□□□ 0.11
PTPN6P29350 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PTPN6P29350 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
PTPN6P29350 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.74■□□□□ 0.11
PTPN6P29350 PGM5P2-202ENST00000637225 1043 ntBASIC15.74■□□□□ 0.11
PTPN6P29350 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.74■□□□□ 0.11
PTPN6P29350 AL805961.1-202ENST00000641562 540 ntBASIC15.74■□□□□ 0.11
PTPN6P29350 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PTPN6P29350 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.74■□□□□ 0.11
PTPN6P29350 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
PTPN6P29350 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PTPN6P29350 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
PTPN6P29350 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PTPN6P29350 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
PTPN6P29350 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.74■□□□□ 0.11
PTPN6P29350 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PTPN6P29350 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
PTPN6P29350 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.74■□□□□ 0.11
PTPN6P29350 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PTPN6P29350 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PTPN6P29350 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PTPN6P29350 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
PTPN6P29350 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.74■□□□□ 0.11
PTPN6P29350 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
PTPN6P29350 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PTPN6P29350 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms