Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LMO1P25800 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
LMO1P25800 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
LMO1P25800 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LMO1P25800 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LMO1P25800 VN2R19P-201ENST00000442399 1052 ntBASIC13.93□□□□□ -0.18
LMO1P25800 AC009947.1-201ENST00000444350 727 ntBASIC13.93□□□□□ -0.18
LMO1P25800 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC13.93□□□□□ -0.18
LMO1P25800 CD63-204ENST00000546939 779 ntTSL 3 BASIC13.93□□□□□ -0.18
LMO1P25800 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
LMO1P25800 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LMO1P25800 LITAF-211ENST00000572255 516 ntTSL 4 BASIC13.93□□□□□ -0.18
LMO1P25800 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
LMO1P25800 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC13.93□□□□□ -0.18
LMO1P25800 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC13.93□□□□□ -0.18
LMO1P25800 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC13.93□□□□□ -0.18
LMO1P25800 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LMO1P25800 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC13.93□□□□□ -0.18
LMO1P25800 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
LMO1P25800 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LMO1P25800 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC13.93□□□□□ -0.18
LMO1P25800 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LMO1P25800 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
LMO1P25800 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
LMO1P25800 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LMO1P25800 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LMO1P25800 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC13.93□□□□□ -0.18
LMO1P25800 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC13.93□□□□□ -0.18
LMO1P25800 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LMO1P25800 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC13.93□□□□□ -0.18
LMO1P25800 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LMO1P25800 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LMO1P25800 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LMO1P25800 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC13.92□□□□□ -0.18
LMO1P25800 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LMO1P25800 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
LMO1P25800 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC13.92□□□□□ -0.18
LMO1P25800 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC13.92□□□□□ -0.18
LMO1P25800 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
LMO1P25800 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC13.92□□□□□ -0.18
LMO1P25800 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC13.92□□□□□ -0.18
LMO1P25800 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
LMO1P25800 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
LMO1P25800 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LMO1P25800 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LMO1P25800 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
LMO1P25800 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LMO1P25800 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC13.92□□□□□ -0.18
LMO1P25800 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LMO1P25800 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LMO1P25800 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
LMO1P25800 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC13.92□□□□□ -0.18
LMO1P25800 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
LMO1P25800 CSF3-203ENST00000394148 622 ntTSL 3 BASIC13.92□□□□□ -0.18
LMO1P25800 CRYGEP-201ENST00000412192 528 ntBASIC13.92□□□□□ -0.18
LMO1P25800 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LMO1P25800 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC13.92□□□□□ -0.18
LMO1P25800 POLD4-207ENST00000531239 584 ntTSL 2 BASIC13.92□□□□□ -0.18
LMO1P25800 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC13.92□□□□□ -0.18
LMO1P25800 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LMO1P25800 AL031432.2-201ENST00000566714 459 ntBASIC13.92□□□□□ -0.18
LMO1P25800 AL928711.1-201ENST00000570165 459 ntBASIC13.92□□□□□ -0.18
LMO1P25800 RPS15-207ENST00000591032 550 ntTSL 3 BASIC13.92□□□□□ -0.18
LMO1P25800 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LMO1P25800 RPS15-212ENST00000593052 629 ntTSL 2 BASIC13.92□□□□□ -0.18
LMO1P25800 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LMO1P25800 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC13.92□□□□□ -0.18
LMO1P25800 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC13.92□□□□□ -0.18
LMO1P25800 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC13.92□□□□□ -0.18
LMO1P25800 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LMO1P25800 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LMO1P25800 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC13.92□□□□□ -0.18
LMO1P25800 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
LMO1P25800 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC13.92□□□□□ -0.18
LMO1P25800 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
LMO1P25800 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC13.92□□□□□ -0.18
LMO1P25800 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LMO1P25800 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LMO1P25800 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
LMO1P25800 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC13.92□□□□□ -0.18
LMO1P25800 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC13.92□□□□□ -0.18
LMO1P25800 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LMO1P25800 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC13.91□□□□□ -0.18
LMO1P25800 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
LMO1P25800 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LMO1P25800 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC13.91□□□□□ -0.18
LMO1P25800 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LMO1P25800 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
LMO1P25800 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC13.91□□□□□ -0.18
LMO1P25800 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC13.91□□□□□ -0.18
LMO1P25800 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LMO1P25800 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC13.91□□□□□ -0.18
LMO1P25800 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC13.91□□□□□ -0.18
LMO1P25800 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC13.91□□□□□ -0.18
LMO1P25800 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LMO1P25800 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LMO1P25800 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
LMO1P25800 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
LMO1P25800 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC13.91□□□□□ -0.18
LMO1P25800 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms