Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC14.6□□□□□ -0.07
ATF1P18846 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ATF1P18846 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.6□□□□□ -0.07
ATF1P18846 AL590787.1-201ENST00000568856 1315 ntBASIC14.6□□□□□ -0.07
ATF1P18846 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC14.6□□□□□ -0.07
ATF1P18846 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.6□□□□□ -0.07
ATF1P18846 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
ATF1P18846 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ATF1P18846 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ATF1P18846 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ATF1P18846 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ATF1P18846 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ATF1P18846 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ATF1P18846 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC14.6□□□□□ -0.07
ATF1P18846 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
ATF1P18846 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.6□□□□□ -0.07
ATF1P18846 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ATF1P18846 AC243591.1-201ENST00000452967 1364 ntBASIC14.6□□□□□ -0.07
ATF1P18846 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.6□□□□□ -0.07
ATF1P18846 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
ATF1P18846 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ATF1P18846 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.59□□□□□ -0.07
ATF1P18846 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ATF1P18846 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
ATF1P18846 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ATF1P18846 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
ATF1P18846 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ATF1P18846 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
ATF1P18846 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC14.59□□□□□ -0.07
ATF1P18846 AP005117.1-201ENST00000584346 1413 ntBASIC14.59□□□□□ -0.07
ATF1P18846 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.59□□□□□ -0.07
ATF1P18846 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
ATF1P18846 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ATF1P18846 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
ATF1P18846 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ATF1P18846 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ATF1P18846 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ATF1P18846 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ATF1P18846 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ATF1P18846 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
ATF1P18846 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC14.59□□□□□ -0.07
ATF1P18846 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.59□□□□□ -0.07
ATF1P18846 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ATF1P18846 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ATF1P18846 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.59□□□□□ -0.07
ATF1P18846 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ATF1P18846 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ATF1P18846 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
ATF1P18846 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC14.59□□□□□ -0.07
ATF1P18846 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ATF1P18846 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ATF1P18846 PRYP5-201ENST00000451909 266 ntBASIC14.59□□□□□ -0.07
ATF1P18846 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC14.59□□□□□ -0.07
ATF1P18846 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC14.59□□□□□ -0.07
ATF1P18846 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
ATF1P18846 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC14.59□□□□□ -0.07
ATF1P18846 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC14.59□□□□□ -0.07
ATF1P18846 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC14.59□□□□□ -0.07
ATF1P18846 TERC-201ENST00000602385 541 ntBASIC14.59□□□□□ -0.07
ATF1P18846 AL353135.1-201ENST00000606729 504 ntBASIC14.59□□□□□ -0.07
ATF1P18846 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC14.59□□□□□ -0.07
ATF1P18846 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
ATF1P18846 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
ATF1P18846 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.59□□□□□ -0.07
ATF1P18846 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ATF1P18846 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.59□□□□□ -0.07
ATF1P18846 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.59□□□□□ -0.07
ATF1P18846 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ATF1P18846 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
ATF1P18846 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.59□□□□□ -0.07
ATF1P18846 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ATF1P18846 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ATF1P18846 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ATF1P18846 AC002310.6-201ENST00000624451 1377 ntBASIC14.59□□□□□ -0.07
ATF1P18846 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
ATF1P18846 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
ATF1P18846 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
ATF1P18846 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
ATF1P18846 KRT8P49-201ENST00000604166 1432 ntBASIC14.58□□□□□ -0.07
ATF1P18846 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.58□□□□□ -0.07
ATF1P18846 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
ATF1P18846 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
ATF1P18846 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
ATF1P18846 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
ATF1P18846 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.58□□□□□ -0.07
ATF1P18846 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
ATF1P18846 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ATF1P18846 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
ATF1P18846 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.58□□□□□ -0.08
ATF1P18846 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
ATF1P18846 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ATF1P18846 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC14.58□□□□□ -0.08
ATF1P18846 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ATF1P18846 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ATF1P18846 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
ATF1P18846 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ATF1P18846 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ATF1P18846 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.58□□□□□ -0.08
ATF1P18846 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.58□□□□□ -0.08
ATF1P18846 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms